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BSR_inoc_115960

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_115960_1
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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989..2308
DNA (1320bp) protein (440aa)
Putative uncharacterized protein id=1775602 bin=GWE2_Bacteroidetes_42_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
alanine dehydrogenase
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_115960_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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2344..3681
DNA (1338bp) protein (446aa)
Saccharopine dehydrogenase id=3641889 bin=GWC2_Bacteroidetes_40_13 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
saccharopine dehydrogenase
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_115960_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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4033..4965
DNA (933bp) protein (311aa)
Putative uncharacterized protein id=3867463 bin=GWF2_Bacteroidetes_43_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_4
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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4965..6530
DNA (1566bp) protein (522aa)
Ferredoxin-type protein id=3867464 bin=GWF2_Bacteroidetes_43_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
ferredoxin-type protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_5
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6693..7427)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0002F483D2
FkbM family methyltransferase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_6
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7671..9116)
DNA (1446bp) protein (482aa)
Putative uncharacterized protein id=4610500 bin=GWF2_Bacteroidetes_33_38 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
glycosyl transferase family protein
Tax=GWF2_Bacteroidetes_33_38_curated
BSR_inoc_115960_7
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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9622..10383
DNA (762bp) protein (254aa)
Lipopolysaccharide core biosynthesis glycosyl transferase id=3748497 bin=GWF2_Bacteroidetes_35_48 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
Tax=GWF2_Bacteroidetes_35_48_curated
BSR_inoc_115960_8
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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10362..11477
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000348A3CB
Glycosyltransferase {ECO:0000313|EMBL:AHM60220.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
hypothetical protein
BSR_inoc_115960_9
unknown

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11595..11801
DNA (207bp) protein (69aa)

This feature has no annotations

BSR_inoc_115960_trna_1
unknown

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11700..11773
DNA (74bp)
transferRNA Ala
BSR_inoc_115960_10
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(11985..13208)
DNA (1224bp) protein (408aa)
tRNA-specific 2-thiouridylase MnmA id=1902300 bin=GWE2_Bacteroidetes_42_24 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_11
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13726..15393)
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:KIO45637.1}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justesenii.;"
Formate--tetrahydrofolate ligase (EC:6.3.4.3)
formate--tetrahydrofolate ligase n=1 Tax=Butyricimonas synergistica RepID=UPI00036EB084
BSR_inoc_115960_trna_2
unknown

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15725..15796
DNA (72bp)
transferRNA Arg
BSR_inoc_115960_12
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(16276..25317)
DNA (9042bp) protein (3014aa)
Putative uncharacterized protein id=4398476 bin=GWF2_Bacteroidetes_43_11 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
PKD domain-containing protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_13
unknown

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comp(25321..25674)
DNA (354bp) protein (118aa)

This feature has no annotations

BSR_inoc_115960_14
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(25856..26752)
DNA (897bp) protein (299aa)
id=1788123 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWA2_Bacteroidetes_31_9_curated
BSR_inoc_115960_15
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27049..29181
DNA (2133bp) protein (711aa)
prolyl oligopeptidase (EC:3.4.21.26)
Prolyl oligopeptidase {ECO:0000313|EMBL:ADQ78271.1}; EC=3.4.21.26 {ECO:0000313|EMBL:ADQ78271.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Prolyl oligopeptidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T081_PALPW
BSR_inoc_115960_16
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29289..30428
DNA (1140bp) protein (380aa)
DNA mismatch repair protein id=1774859 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Smr domain./Domain of unknown function (DUF2027).
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_17
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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30922..31254
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LV21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKB47994.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
hypothetical protein
BSR_inoc_115960_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31264..31725
DNA (462bp) protein (154aa)
Uncharacterized protein id=1788077 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
putative 5-nitroimadazole antibiotic resistance protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_trna_4
unknown

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comp(31783..31867)
DNA (85bp)
transferRNA Leu
BSR_inoc_115960_trna_3
unknown

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comp(31911..31983)
DNA (73bp)
transferRNA Gly
BSR_inoc_115960_19
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(32039..34627)
DNA (2589bp) protein (863aa)
DNA mismatch repair protein MutS id=2128610 bin=GWE2_Bacteroidetes_42_24 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
DNA mismatch repair protein mutS
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_20
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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34692..35306
DNA (615bp) protein (205aa)
tRNA/rRNA methyltransferase SpoU id=1775437 bin=GWD2_Bacteroidetes_33_33 species=Flavobacteriaceae bacterium S85 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
tRNA/rRNA methyltransferase SpoU
Tax=GWD2_Bacteroidetes_33_33_curated
BSR_inoc_115960_21
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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35492..37978
DNA (2487bp) protein (829aa)
hypothetical protein MsalJ2_08781 id=2128606 bin=GWE2_Bacteroidetes_42_24 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_22
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(38124..38777)
DNA (654bp) protein (218aa)
bifunctional protein : 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase and deoxynucleoside kinase (EC:2.7.6.3 2.7.1.-)
Probable bifunctional protein : 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase and deoxynucleoside kinase id=1767254 bin=GWE2_Bacteroidetes_42_42 species=Flavobacterium indicum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_23
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(38813..39316)
DNA (504bp) protein (168aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase id=2000722 bin=GWD2_Bacteroidetes_40_43 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Tax=GWE2_Bacteroidetes_40_63_curated
BSR_inoc_115960_24
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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39408..41183
DNA (1776bp) protein (592aa)
Signal peptide peptidase SppA, 67K type id=3719251 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
signal peptide peptidase SppA, 67K type
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_115960_25
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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41268..41813
DNA (546bp) protein (182aa)
5-formyltetrahydrofolate cyclo-ligase id=2594723 bin=GWF2_Bacteroidetes_38_335 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
5-formyltetrahydrofolate cyclo-ligase
Tax=GWF2_Bacteroidetes_38_335_curated
BSR_inoc_115960_26
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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41860..42960
DNA (1101bp) protein (367aa)
Putative uncharacterized protein id=3719253 bin=GWF2_Bacteroidetes_43_11 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
ParA/MinD-like ATPase
Tax=GWF2_Bacteroidetes_43_11_curated
Displaying 30 items

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