ggKbase home page

BSR_inoc_143996

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_143996_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

2..115
DNA (114bp) protein (38aa)
Transposase IS4 family protein id=3181452 bin=GWA2_Bacteroidetes_40_14 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_40_14 organism_group=Bacteroidetes organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
BSR_inoc_143996_2
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(280..1512)
DNA (1233bp) protein (411aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1125723 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 279 str. F0450.;"
Pseudouridine synthase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6H115_9PORP
ribosomal large subunit pseudouridine synthase B
BSR_inoc_143996_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1820..3658
DNA (1839bp) protein (613aa)
Xenobiotic-transporting ATPase id=2179377 bin=GWE2_Bacteroidetes_42_24 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
putative lipid A export ATP-binding/permease protein MsbA
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

3670..4869
DNA (1200bp) protein (400aa)
Amidohydrolase id=2179330 bin=GWE2_Bacteroidetes_42_24 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
N-acyl-L-amino acid amidohydrolase
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_143996_5
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4925..5530)
DNA (606bp) protein (202aa)
phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
phosphoribosylglycinamide formyltransferase id=3849705 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=RBG_13_Bacteroidetes_46_8_curated
BSR_inoc_143996_6
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists


comp(5527..6225)
DNA (699bp) protein (233aa)
Putative glycoprotease family exported protein id=4161874 bin=GWF2_Bacteroidetes_41_31 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_143996_7
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6338..7438)
DNA (1101bp) protein (367aa)
family 2 glycosyl transferase id=2141287 bin=GWD2_Bacteroidetes_33_33 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
family 2 glycosyl transferase
Tax=GWA2_Bacteroidetes_31_9b_curated
BSR_inoc_143996_8
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7445..8470)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein id=1837234 bin=GWE2_Bacteroidetes_42_24 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_9
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8488..9045
DNA (558bp) protein (186aa)
Crossover junction endodeoxyribonuclease RuvC id=4498004 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
crossover junction endodeoxyribonuclease RuvC
Tax=GWF2_Bacteroidetes_41_31_curated
BSR_inoc_143996_10
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10283..10561
DNA (279bp) protein (93aa)
ribosome-binding factor A id=2179379 bin=GWE2_Bacteroidetes_42_24 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
ribosome-binding factor A
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_11
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10567..11394
DNA (828bp) protein (276aa)
Type 11 methyltransferase id=4006289 bin=GWF2_Bacteroidetes_43_11 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
methyltransferase type 11
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_12
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11408..12649
DNA (1242bp) protein (414aa)
ABC-type transport system, involved in lipoprotein release, permease component id=3770454 bin=GWF2_Bacteroidetes_33_38 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
lipoprotein release ABC transporter permease
Tax=GWF2_Bacteroidetes_33_38_curated
BSR_inoc_143996_13
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12771..16655
DNA (3885bp) protein (1295aa)
Putative Gingipain R id=1947603 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
kgp; lysine-specific cysteine proteinase Kgp
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_14
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16795..20637
DNA (3843bp) protein (1281aa)
Putative Gingipain R id=1947600 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
rgpA; arginine-specific cysteine proteinase RgpA
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_15
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20652..21602)
DNA (951bp) protein (317aa)
iron-sulfur cluster binding protein id=1808089 bin=GWE2_Bacteroidetes_42_24 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
iron-sulfur cluster binding protein
Tax=RBG_13_Bacteroidetes_43_22_curated
BSR_inoc_143996_16
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21616..22638)
DNA (1023bp) protein (341aa)
Holliday junction ATP-dependent DNA helicase RuvB id=4645993 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
ruvB; Holliday junction DNA helicase RuvB
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_17
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22868..23698
DNA (831bp) protein (277aa)
universal stress protein id=1808095 bin=GWE2_Bacteroidetes_42_24 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
universal stress protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23712..24125
DNA (414bp) protein (138aa)
Sporulation domain-containing protein id=1808098 bin=GWE2_Bacteroidetes_42_24 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
sporulation domain-containing protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_19
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

24203..25048
DNA (846bp) protein (282aa)
universal stress protein id=1808101 bin=GWE2_Bacteroidetes_42_24 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
UspA domain-containing protein
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_143996_20
unknown

Not on your lists

comp(25342..25518)
DNA (177bp) protein (59aa)

This feature has no annotations

BSR_inoc_143996_21
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25566..26648)
DNA (1083bp) protein (361aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase id=2113784 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=Sulfuricurvum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_22
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26861..27850)
DNA (990bp) protein (330aa)
Mannose-6-phosphate isomerase, type 1 id=2157791 bin=GWE2_Bacteroidetes_42_24 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
mannose-6-phosphate isomerase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_23
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27936..28631
DNA (696bp) protein (232aa)
Uncharacterized protein id=1902372 bin=GWE2_Bacteroidetes_42_24 species=Phaeospirillum molischianum genus=Phaeospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_143996_24
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

28631..29191
DNA (561bp) protein (187aa)
Putative uncharacterized protein id=3527851 bin=GWF2_Bacteroidetes_43_11 species=ACD80 genus=ACD80 taxon_order=ACD80 taxon_class=ACD80 phylum=SR1 tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
Displaying 24 items

View Taxonomy