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BSR_inoc_29979

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_29979_1
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

2..133
DNA (132bp) protein (44aa)
Tax=CG_Bacteroid_01
BSR_inoc_29979_2
unknown

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180..503
DNA (324bp) protein (108aa)

This feature has no annotations

BSR_inoc_29979_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1187..2179
DNA (993bp) protein (331aa)
id=1946594 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_4
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2376..3020)
DNA (645bp) protein (215aa)
id=1774837 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_5
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3138..3761)
DNA (624bp) protein (208aa)
rhomboid family protein id=4043247 bin=GWF2_Bacteroidetes_43_11 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Rhomboid family membrane protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_6
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3778..4605)
DNA (828bp) protein (276aa)
Uncharacterized protein id=4043248 bin=GWF2_Bacteroidetes_43_11 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_7
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(4613..5539)
DNA (927bp) protein (309aa)
Cation diffusion facilitator family transporter id=3881475 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AFN74439.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
BSR_inoc_29979_8
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(5611..8562)
DNA (2952bp) protein (984aa)
Glycoside hydrolase, family 3 id=3902344 bin=GWF2_Bacteroidetes_43_63 species=uncultured Cytophagia bacterium genus=unknown taxon_order=unknown taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
beta-N-acetylglucosaminidase
Tax=GWF2_Bacteroidetes_43_63_curated
BSR_inoc_29979_9
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8681..9253
DNA (573bp) protein (191aa)
RNA polymerase sigma70 factor n=1 Tax=Pontibacter roseus RepID=UPI00036FED4C
RNA polymerase sigma factor
Tax=GWA2_Bacteroidetes_31_9_curated
BSR_inoc_29979_10
unknown

Not on your lists

9303..9824
DNA (522bp) protein (174aa)

This feature has no annotations

BSR_inoc_29979_11
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9829..10323
DNA (495bp) protein (165aa)
Putative uncharacterized protein id=4043255 bin=GWF2_Bacteroidetes_43_11 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_12
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10409..11332)
DNA (924bp) protein (308aa)
Putative uncharacterized protein id=3690562 bin=GWF2_Bacteroidetes_33_16 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_32_14_curated
BSR_inoc_29979_13
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11413..12477
DNA (1065bp) protein (355aa)
NAD-dependent aldehyde dehydrogenase id=1856543 bin=GWD2_Bacteroidetes_33_33 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
NAD-dependent aldehyde dehydrogenase
Tax=GWF2_Bacteroidetes_35_48_curated
BSR_inoc_29979_14
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


12551..12817
DNA (267bp) protein (89aa)
50S ribosomal protein L31 type B id=3083958 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
50S ribosomal protein L31
Tax=BJP_08E140C01_Bacteriodales_41_10
BSR_inoc_29979_15
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13146..14336
DNA (1191bp) protein (397aa)
Hexapeptide transferase family protein id=2045414 bin=GWE2_Bacteroidetes_42_24 species=Polaribacter sp. MED152 genus=Polaribacter taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_16
RBG_13_Bacteroidetes_44_24_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14428..14592)
DNA (165bp) protein (55aa)
Putative uncharacterized protein id=2218000 bin=GWB2_Bacteroidetes_32_14 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
Tax=RBG_13_Bacteroidetes_44_24_curated
BSR_inoc_29979_17
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(14642..15340)
DNA (699bp) protein (233aa)
tRNA/rRNA methyltransferase (SpoU) id=4372128 bin=GWF2_Bacteroidetes_41_31 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
tRNA (guanosine-2'-O-)-methyltransferase
Tax=CG_Bacteroid_02
BSR_inoc_29979_18
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15529..27783)
DNA (12255bp) protein (4085aa)
PKD domain protein id=1892532 bin=GWE2_Bacteroidetes_42_24 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
PDK repeat-containing protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_19
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28649..29128
DNA (480bp) protein (160aa)
Superoxide dismutase id=3615782 bin=GWF2_Bacteroidetes_43_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Manganese/iron superoxide dismutase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_20
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29512..29976
DNA (465bp) protein (155aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit id=1780255 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
NADH dehydrogenase
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_21
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30014..31177
DNA (1164bp) protein (388aa)
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit id=1780256 bin=GWE2_Bacteroidetes_42_24 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
dehydrogenase
Tax=GWF2_Bacteroidetes_49_14_curated
BSR_inoc_29979_22
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31199..32989
DNA (1791bp) protein (597aa)
Fe-only hydrogenase, catalytic subunit alpha id=1780257 bin=GWE2_Bacteroidetes_42_24 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
ferredoxin
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_23
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33095..33487
DNA (393bp) protein (131aa)
Response regulator receiver protein id=1780258 bin=GWE2_Bacteroidetes_42_24 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
OmpR; response regulator
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_24
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34075..35223
DNA (1149bp) protein (383aa)
Putative uncharacterized protein id=1780095 bin=GWE2_Bacteroidetes_42_24 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_25
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35214..36041)
DNA (828bp) protein (276aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KEQ30379.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
2-dehydro-3-deoxyphosphooctonate aldolase id=4217469 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
BSR_inoc_29979_26
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36057..37325)
DNA (1269bp) protein (423aa)
ATPase, AAA family id=4018539 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
ATPase AAA
Tax=GWF2_Bacteroidetes_41_31_curated
BSR_inoc_29979_27
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37329..37955)
DNA (627bp) protein (209aa)
outer membrane lipoprotein carrier protein LolA id=1864293 bin=GWE2_Bacteroidetes_42_24 species=Pedobacter agri genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
outer membrane lipoprotein carrier protein LolA
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_28
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37974..40511)
DNA (2538bp) protein (846aa)
DNA segregation ATPase, FtsK/SpoIIIE family id=4217457 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
DNA segregation ATPase FtsK
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_29979_29
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40944..41411
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5VJQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ80937.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
guaD; guanine deaminase
BSR_inoc_29979_30
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41433..41825
DNA (393bp) protein (131aa)
Uncharacterized protein id=2190235 bin=GWE2_Bacteroidetes_42_24 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
Displaying items 1-30 of 35 in total

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