ggKbase home page

BSR_inoc_135868

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_135868_1
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

419..1690
DNA (1272bp) protein (424aa)
Aminopeptidase id=4554410 bin=GWF2_Bacteroidetes_43_11 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
peptidase M28
Tax=CG_Bacteroid_02
BSR_inoc_135868_2
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1952..2848)
DNA (897bp) protein (299aa)
gliding motility associated protein GldN id=1778849 bin=GWE2_Bacteroidetes_42_24 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
gliding motility protein GldN
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2855..4471)
DNA (1617bp) protein (539aa)
Gliding motility-associated protein GldM id=1778850 bin=GWE2_Bacteroidetes_42_24 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
gliding motility-associated protein GldM
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_4
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4522..5721)
DNA (1200bp) protein (400aa)
Gliding motility-associated protein GldL id=1778851 bin=GWE2_Bacteroidetes_42_24 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
gliding motility protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_5
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5768..7183)
DNA (1416bp) protein (472aa)
hypothetical protein MsalJ2_16864 id=1778852 bin=GWE2_Bacteroidetes_42_24 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_6
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7260..8264)
DNA (1005bp) protein (335aa)
Bacteroidetes-specific putative membrane protein id=1778856 bin=GWE2_Bacteroidetes_42_24 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
membrane protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_7
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8629..9534
DNA (906bp) protein (302aa)
Putative uncharacterized protein id=3903527 bin=GWF2_Bacteroidetes_40_13 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
BSR_inoc_135868_8
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9559..10452
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=1778868 bin=GWE2_Bacteroidetes_42_24 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_9
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10758..11432
DNA (675bp) protein (225aa)
hypothetical protein MsalJ2_02872 id=4500760 bin=GWF2_Bacteroidetes_43_11 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_10
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11419..12084)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IJW4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCY37006.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
hypothetical protein
BSR_inoc_135868_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(12089..13591)
DNA (1503bp) protein (501aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL id=4500758 bin=GWF2_Bacteroidetes_43_11 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
RNA polymerase, sigma 54 subunit, RpoN/SigL
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_135868_12
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13767..15155)
DNA (1389bp) protein (463aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
Asparagine--tRNA ligase id=3801520 bin=GWF2_Bacteroidetes_43_63 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
asparaginyl-tRNA synthetase
BSR_inoc_135868_13
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15632..15934
DNA (303bp) protein (101aa)
transcriptional regulator id=1778760 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
ArsR family transcriptional regulator
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_14
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16319..19789
DNA (3471bp) protein (1157aa)
DNA-directed DNA polymerase III PolC id=3859199 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_15
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19834..20151
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KXY0_SOLCM
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
BSR_inoc_135868_16
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20225..21157
DNA (933bp) protein (311aa)
Uncharacterized protein id=2170195 bin=GWE2_Bacteroidetes_42_24 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_135868_17
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21337..21960)
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R6YD36_9BACE
cytidylate kinase
Tax=RBG_13_Bacteroidetes_43_22_curated
BSR_inoc_135868_18
unknown

Not on your lists

22101..22196
DNA (96bp) protein (32aa)

This feature has no annotations

BSR_inoc_135868_19
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22193..22555
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Bacteroides finegoldii RepID=K5BUV7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKJ92107.1}; TaxID=997888 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii CL09T03C10.;"
transposase
Displaying 19 items

View Taxonomy