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BSR_inoc_181279

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_181279_1
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..461)
DNA (459bp) protein (153aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
RNA-splicing ligase RtcB n=1 Tax=Clostridium intestinale URNW RepID=U2NP76_9CLOT
hypothetical protein
BSR_inoc_181279_2
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(485..1186)
DNA (702bp) protein (234aa)
Putative metal-dependent phosphoesterase, PHP family id=4335139 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
PHP domain-containing protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_181279_3
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(1177..1518)
DNA (342bp) protein (114aa)
DRTGG domain-containing protein id=4335141 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_4
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(1523..2401)
DNA (879bp) protein (293aa)
Putative transcriptional regulator, contains C-terminal CBS domains id=4335143 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
putative transcriptional regulator, contains C-terminal CBS domains
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_5
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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2561..3664
DNA (1104bp) protein (368aa)
Leucyl aminopeptidase (Aminopeptidase T) id=4335147 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
leucyl aminopeptidase
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_6
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(3661..4521)
DNA (861bp) protein (287aa)
Formyltetrahydrofolate deformylase id=4335151 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
formyltetrahydrofolate deformylase
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_7
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(4521..4742)
DNA (222bp) protein (74aa)
Exodeoxyribonuclease 7 small subunit id=4335152 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_181279_8
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(4742..5965)
DNA (1224bp) protein (408aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit id=4335154 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_181279_9
unknown

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comp(5962..6591)
DNA (630bp) protein (210aa)

This feature has no annotations

BSR_inoc_181279_10
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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comp(6612..6782)
DNA (171bp) protein (57aa)
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein id=4335158 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
4Fe-4S binding protein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_181279_11
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

6914..9124
DNA (2211bp) protein (737aa)
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase id=4335160 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_12
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

9121..10119
DNA (999bp) protein (333aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase id=4335166 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_13
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(10116..11330)
DNA (1215bp) protein (405aa)
dihydrodipicolinate reductase (EC:1.3.1.26 2.7.2.4)
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RVF1_SPHGB
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_14
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

11511..12266
DNA (756bp) protein (252aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase id=4335221 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_15
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

12282..13166
DNA (885bp) protein (295aa)
Dihydrodipicolinate synthase id=4335223 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
dihydrodipicolinate synthase
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_181279_16
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13179..14426
DNA (1248bp) protein (416aa)
LL-diaminopimelate aminotransferase (EC:2.6.1.83)
LL-diaminopimelate aminotransferase id=4335225 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_17
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

14416..15657
DNA (1242bp) protein (414aa)
Diaminopimelate decarboxylase id=4335228 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
diaminopimelate decarboxylase
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_18
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15665..16069
DNA (405bp) protein (135aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RVF8_SPHGB
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:ADY12950.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_181279_19
unknown

Not on your lists

comp(16056..17060)
DNA (1005bp) protein (335aa)
hypothetical protein
BSR_inoc_181279_20
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(17124..18287)
DNA (1164bp) protein (388aa)
Dipeptidase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUB2_SPHPG
dipeptidase
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_181279_21
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(18290..19159)
DNA (870bp) protein (290aa)
Peptide methionine sulfoxide reductase MsrA id=3382910 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
methionine-S-sulfoxide reductase
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_181279_22
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19297..19830)
DNA (534bp) protein (178aa)
Putative permease n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0A0_CLOCD
putative permease
Putative permease {ECO:0000313|EMBL:AEV66907.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
BSR_inoc_181279_23
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19846..20325)
DNA (480bp) protein (160aa)
Putative permease n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M099_CLOCD
putative permease
Putative permease {ECO:0000313|EMBL:AEV66906.1}; Flags: Precursor;; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
BSR_inoc_181279_24
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

20631..23081
DNA (2451bp) protein (817aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RRU8_SPHGB
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ADY14553.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Displaying 24 items

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