ggKbase home page

BSR_inoc_217833_4

Organism: BSR_inoc_Spirochatetes_46_10

near complete RP 49 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38
Location: 2859..3878

Top 3 Functional Annotations

Value Algorithm Source
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein id=24589305 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 333.0
  • Bit_score: 284
  • Evalue 1.10e-73
sugar ABC transporter periplasmatic substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 313.0
  • Bit_score: 231
  • Evalue 1.90e-58
Tax=RBG_13_Actinobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 341.0
  • Bit_score: 367
  • Evalue 1.10e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Actinobacteria_35_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGTCATAGTTGTGGTTTTGATGATGGCAACTCTGTTTGCTGCTGCACAACGGGAAGTTGAAACAAAGCCTATTTATTTGGCATCATCAATAAGAAATCTAGCTAATGCTTATCACTTTGCATTGGCTGAAGGGGCGCGTTTGTTTGCTCGAAGCATTGGACAGGAGGGCTATTTCCAAGTGCTAGCGAGTGAAGGATCCAGTGAAAAACAGCTGAACGATATAAAAGCGTTAGTTGCAAAATCTGGTGGCAATGCGGTGTTCCATATCGATCCAAATGAGGCGATAGATGTCATAGCCATCGCCAGAGAGTTAACTGCTGCTAAATGCTACTTCGTTACCAATTACAACAAGCCGGAAGATGTTGATGTTGCTGATTACCCCTATTGGGTAACTCACATGGGAGTCCAGAGTGAAGGTTGTGGATATGCAACTGCGAAGGCTCTCCTTTCAAAGATTGGTGGTAGAGGTAAGGTGTTTGTCCTCAGAGGAATGCTTGGTAACAACGCTGACATTGAACGTTATGCGGGATTCGAACGTGCTCTAAAAGAGTTCCCCAATGTTCAAGTCATAGGGTGGGAATCTGCAGATTGGCTCAAACAGAGAGCCTACAATATCGTCTCCAACAAATTGATTTCAGATCCTGATCTAGCTGCTATTTGGTCGGCAAACGATGACATGGCAGCAGGGGCAATCGAAGCTCTCAGGGCCAAGGGGCTGAATGGAAAGGTCGTAGTGACCGGAGCAGATGCGACACCTGAGATGTTAGATCTAATCAAGAAAGGTGATGCCTTGATGACTGCTTCTGCCGATCCATATTGGCAAGCTGGAATTGGGCTTGCAATGGCATATGCTGCACAGACAGGCAAGTTGGATGTTGCAGCTTTACCGGCAACAAAGAGAAATTGGAGAACCCCGATGGTGATGGTGGATGCGAGCAACGTTGATGAAATGTTGTCAATGACAGAGAATCCTCCTAAGATTGATTATACTGATTTCTGGGGAAGGTGGTCTGAATAA
PROTEIN sequence
Length: 340
MVIVVVLMMATLFAAAQREVETKPIYLASSIRNLANAYHFALAEGARLFARSIGQEGYFQVLASEGSSEKQLNDIKALVAKSGGNAVFHIDPNEAIDVIAIARELTAAKCYFVTNYNKPEDVDVADYPYWVTHMGVQSEGCGYATAKALLSKIGGRGKVFVLRGMLGNNADIERYAGFERALKEFPNVQVIGWESADWLKQRAYNIVSNKLISDPDLAAIWSANDDMAAGAIEALRAKGLNGKVVVTGADATPEMLDLIKKGDALMTASADPYWQAGIGLAMAYAAQTGKLDVAALPATKRNWRTPMVMVDASNVDEMLSMTENPPKIDYTDFWGRWSE*