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BSR_inoc_217833

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_217833_1
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

318..1073
DNA (756bp) protein (252aa)
Transcriptional regulator, IclR family n=1 Tax=Aminobacterium colombiense (strain DSM 12261 / ALA-1) RepID=D5EGV7_AMICL
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADE57789.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colombiense (strain DSM 12261 / ALA-1).;"
BSR_inoc_217833_2
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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1070..1732
DNA (663bp) protein (221aa)
Entner-Doudoroff aldolase n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BYR9_ANAMD
Entner-Doudoroff aldolase
Entner-Doudoroff aldolase {ECO:0000313|EMBL:AFM22426.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
BSR_inoc_217833_3
Fretibacterium fastidiosum, Fretibacterium, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

1736..2767
DNA (1032bp) protein (344aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Sugar kinases, ribokinase family {ECO:0000313|EMBL:CBL28258.1}; EC=2.7.1.45 {ECO:0000313|EMBL:CBL28258.1};; TaxID=651822 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Fretibacterium.;" source="Fretibacterium fastidiosum.;"
Sugar kinases, ribokinase family n=1 Tax=Fretibacterium fastidiosum RepID=D4M8R3_9BACT
BSR_inoc_217833_4
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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2859..3878
DNA (1020bp) protein (340aa)
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein id=24589305 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Mesorhizobium amorphae genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
sugar ABC transporter periplasmatic substrate-binding protein
Tax=RBG_13_Actinobacteria_35_12_curated
BSR_inoc_217833_5
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

3981..4940
DNA (960bp) protein (320aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Amino acid or sugar ABC transport system, permease protein, putative id=4288062 bin=GWC2_Spirochaete_52_13 species=Octadecabacter antarcticus genus=Octadecabacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=RBG_13_Actinobacteria_35_12_curated
BSR_inoc_217833_6
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

4953..6473
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B0564
putative Monosaccharide-transporting ATPase
Tax=RBG_13_Actinobacteria_35_12_curated
BSR_inoc_217833_7
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

6489..7439
DNA (951bp) protein (317aa)
Amino acid or sugar ABC transport system, permease protein, putative id=4288068 bin=GWC2_Spirochaete_52_13 species=Octadecabacter antarcticus genus=Octadecabacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
sugar ABC transporter permease protein
Tax=RBG_13_Actinobacteria_35_12_curated
BSR_inoc_217833_8
MPF_Thermotoga_lettingae_39_14, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

7517..8521
DNA (1005bp) protein (335aa)
Aldo/keto reductase n=1 Tax=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) RepID=A8F3M6_THELT
aldo/keto reductase
Tax=MPF_Thermotoga_lettingae_39_14
BSR_inoc_217833_9
unknown

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8525..9076
DNA (552bp) protein (184aa)

This feature has no annotations

BSR_inoc_217833_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9125..9553
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPM4_CLOPF
Fucose isomerase {ECO:0000313|EMBL:KJU71129.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
fucU; fucose operon protein FucU
BSR_inoc_217833_11
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(9611..10399)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00037ADF31
short-chain dehydrogenase/reductase SDR
Tax=Caldatribacterium saccharofermentans
BSR_inoc_217833_12
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(10351..10905)
DNA (555bp) protein (185aa)
Putative anion transporter id=3622238 bin=GWC2_Spirochaete_52_13 species=Carnobacterium sp. genus=Carnobacterium taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
chromate transporter
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_217833_13
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(10902..11471)
DNA (570bp) protein (190aa)
Chromate transport protein id=3622239 bin=GWC2_Spirochaete_52_13 species=Carnobacterium sp. AT7 genus=Carnobacterium taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
chromate transporter
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_217833_14
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(11499..12215)
DNA (717bp) protein (239aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type id=3622240 bin=GWC2_Spirochaete_52_13 species=Clostridium colicanis genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_217833_15
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12486..13991
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
ribose transport ATP-binding protein RbsA (EC:3.6.3.17)
hypothetical protein n=1 Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B7575D
BSR_inoc_217833_16
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14008..15009
DNA (1002bp) protein (334aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) RepID=G4FGN4_THEMA
Ribose ABC transporter permease {ECO:0000313|EMBL:KJS50570.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
sugar ABC transporter permease
BSR_inoc_217833_17
bacterium UASB270, Bacteria

Not on your lists

15056..16054
DNA (999bp) protein (333aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) RepID=G4FGN5_THEMA
ABC transporter sugar-binding protein {ECO:0000313|EMBL:GAK60808.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
LacI family transcriptional regulator
BSR_inoc_217833_18
RBG_13_Chloroflexi_68_17_curated, Chloroflexi, Bacteria

Not on your lists

16134..17615
DNA (1482bp) protein (494aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VWB2_9CLOT
xylB; xylulose kinase
Tax=RBG_13_Chloroflexi_68_17_curated
BSR_inoc_217833_19

Not on your lists

comp(17601..18587)
DNA (987bp) protein (329aa)
Deoxyribonucleoside regulator n=1 Tax=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) RepID=B2GG39_KOCRD
Marine sediment metagenome DNA, contig: S01H4_C01367 {ECO:0000313|EMBL:GAG67604.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sugar-binding domain-containing protein
BSR_inoc_217833_20
Brevibacillus sp. CF112, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18609..20291
DNA (1683bp) protein (561aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=1144311 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. CF112.;"
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Brevibacillus sp. CF112 RepID=J3BBB6_9BACL
C_GCAxxG_C_C family protein
BSR_inoc_217833_21
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

20346..21263
DNA (918bp) protein (306aa)
Ribosylpyrimidine nucleosidase id=3622248 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ribosylpyrimidine nucleosidase
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_217833_22
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(21260..21886)
DNA (627bp) protein (209aa)
Nitroreductase id=3622250 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
nitroreductase
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_217833_23
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21883..22596)
DNA (714bp) protein (238aa)
Purine-nucleoside phosphorylase {ECO:0000256|SAAS:SAAS00035203}; EC=2.4.2.1 {ECO:0000256|SAAS:SAAS00035203};; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Purine-nucleoside phosphorylase, DeoD family n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QRV4_SPHPG
purine-nucleoside phosphorylase, DeoD family
BSR_inoc_217833_24
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(22596..23504)
DNA (909bp) protein (303aa)
Putative ABC-type transport system, permease component id=3622253 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ABC transporter inner membrane protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_217833_25
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(23501..24619)
DNA (1119bp) protein (373aa)
ABC-type uncharacterized transport system, permease component id=3622255 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ABC transporter permease
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_217833_26
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(24616..26202)
DNA (1587bp) protein (529aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
ATPase component of uncharacterized ABC-type transporter id=3622257 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta pleomorpha genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_217833_27
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

comp(26226..27323)
DNA (1098bp) protein (366aa)
Basic membrane lipoprotein id=3622259 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
basic membrane lipoprotein
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_217833_28
Staphylococcus simulans, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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27594..27818
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Staphylococcus simulans RepID=K8NSV4_STASI
Uncharacterized protein {ECO:0000313|EMBL:ERS94213.1}; TaxID=1405498 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus simulans UMC-CNS-990.;"
hypothetical protein
BSR_inoc_217833_29
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

Not on your lists

27818..29671
DNA (1854bp) protein (618aa)
Heavy metal translocating P-type ATPase id=4681817 bin=GWC2_Spirochaete_52_13 species=Alkaliphilus oremlandii genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
heavy metal translocating P-type ATPase
Tax=GWC2_Spirochaetes_52_13_curated
BSR_inoc_217833_30
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

29687..30364
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00035F8256
transcriptional regulator, Crp/Fnr family
Tax=BJP_08E140C01_Spirochaeta_53_29
Displaying items 1-30 of 61 in total

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