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BSR_inoc_120325

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_120325_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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1..1113
DNA (1113bp) protein (371aa)
permease n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B05A0
permease
Tax=GWF2_Bacteroidetes_41_31_curated
BSR_inoc_120325_2
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

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1163..1606
DNA (444bp) protein (148aa)
protein-tyrosine phosphatase, low molecular weight (EC:1.20.4.1)
protein tyrosine phosphatase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DB20
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_3
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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1658..2812
DNA (1155bp) protein (385aa)
Uncharacterized protein family UPF0027 n=2 Tax=Nitrosococcus oceani RepID=B6BY99_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHE91438.1}; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
hypothetical protein
BSR_inoc_120325_4
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

comp(2840..3727)
DNA (888bp) protein (296aa)
Malonyl CoA-acyl carrier protein transacylase id=4398374 bin=GWF2_Bacteroidetes_43_11 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
fabD; [acyl-carrier-protein] S-malonyltransferase
Tax=BJP_IG2103_Bacteroidetes_37_22
BSR_inoc_120325_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3738..4469)
DNA (732bp) protein (244aa)
Putative uncharacterized protein id=4161893 bin=GWF2_Bacteroidetes_41_31 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
BSR_inoc_120325_6
unknown

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comp(4472..4645)
DNA (174bp) protein (58aa)

This feature has no annotations

BSR_inoc_120325_7
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4662..5528
DNA (867bp) protein (289aa)
Lipoprotein, putative n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JNG0_9BACT
Lipoprotein, putative {ECO:0000313|EMBL:ELR69069.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
BSR_inoc_120325_8
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(5610..6287)
DNA (678bp) protein (226aa)
GTP cyclohydrolase 1 id=1788227 bin=GWE2_Bacteroidetes_42_24 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
GTP cyclohydrolase I
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_9
Bacillus lehensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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6649..7098
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11VG0_CYTH3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC92622.1}; TaxID=1246626 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus lehensis G1.;"
BSR_inoc_120325_10
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(7200..7706)
DNA (507bp) protein (169aa)
Sigma-70 family RNA polymerase sigma factor id=3221853 bin=GWF2_Bacteroidetes_43_11 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
RNA polymerase sigma factor
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_11
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(7918..8421)
DNA (504bp) protein (168aa)
Sigma-70 family RNA polymerase sigma factor id=3221853 bin=GWF2_Bacteroidetes_43_11 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
RNA polymerase sigma factor
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_12
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8627..9655)
DNA (1029bp) protein (343aa)
Transcriptional regulator, MerR family id=4377399 bin=GWC2_Bacteroidetes_33_15 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
putative transcriptional regulator
Tax=GWD2_Bacteroidetes_33_33_curated
BSR_inoc_120325_13
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9750..10166)
DNA (417bp) protein (139aa)
id=4398367 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_43_11_curated
BSR_inoc_120325_14
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

comp(10341..10760)
DNA (420bp) protein (140aa)
hypothetical protein AnHS1_01758 id=1897963 bin=GWE2_Bacteroidetes_29_8 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
cell shape determination protein CcmA
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
BSR_inoc_120325_15
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(10887..13607)
DNA (2721bp) protein (907aa)
Putative uncharacterized protein id=4161814 bin=GWF2_Bacteroidetes_41_31 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_16
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

13709..14623
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DFV3_9PORP
metalloendopeptidase-like membrane protein
Tax=CG_Bacteroid_01
BSR_inoc_120325_17
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14673..15845
DNA (1173bp) protein (391aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
hypothetical protein n=1 Tax=Flavobacterium sp. MS220-5C RepID=UPI00034D6D1D
BSR_inoc_120325_18
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15846..17186
DNA (1341bp) protein (447aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
Peptidase family M50 n=1 Tax=Polaribacter sp. MED152 RepID=A2TZL3_9FLAO
peptidase family M50
BSR_inoc_120325_19
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

17267..18520
DNA (1254bp) protein (418aa)
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8MRN1_9CYAN
PAS/PAC sensor hybrid histidine kinase
Tax=RBG_19FT_COMBO_JS1_35_14_curated
BSR_inoc_120325_20
unknown

Not on your lists

18930..19595
DNA (666bp) protein (222aa)

This feature has no annotations

BSR_inoc_120325_21
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

19777..20751
DNA (975bp) protein (325aa)
Bacteroidetes-specific putative membrane protein id=4500766 bin=GWF2_Bacteroidetes_43_11 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Bacteroidetes-specific putative membrane protein
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_22
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

20923..22320
DNA (1398bp) protein (466aa)
hypothetical protein MsalJ2_16864 id=4161720 bin=GWF2_Bacteroidetes_41_31 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_23
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22384..23454
DNA (1071bp) protein (357aa)
protein involved in gliding motility gldl id=4161718 bin=GWF2_Bacteroidetes_41_31 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
gldL; gliding motility-like protein
Tax=GWF2_Bacteroidetes_41_31_curated
BSR_inoc_120325_24
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23491..25110
DNA (1620bp) protein (540aa)
hypothetical protein MsalJ2_16874 id=2919865 bin=GWF2_Bacteroidetes_40_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
gliding motility-associated protein GldM
Tax=GWF2_Bacteroidetes_40_14_curated
BSR_inoc_120325_25
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

25131..26009
DNA (879bp) protein (293aa)
Gliding motility associated protein GldN id=4161715 bin=GWF2_Bacteroidetes_41_31 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
gldN; gliding motility protein GldN
Tax=BJP_IG2103_Bacteroidetes_41_9
BSR_inoc_120325_26
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

26230..27513
DNA (1284bp) protein (428aa)
ATP-dependent DNA helicase RecG n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R2H3_OWEHD
ATP-dependent DNA helicase RecG
Tax=CG_Bacteroid_01
Displaying 26 items

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