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BSR_inoc_85921

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_85921_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3..404
DNA (402bp) protein (134aa)
Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Z1_9FIRM
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
electron transport complex, RnfABCDGE type, E subunit
BSR_inoc_85921_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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404..979
DNA (576bp) protein (192aa)
Electron transport complex, RnfABCDGE type, A subunit n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Z2_9FIRM
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
electron transport complex, RnfABCDGE type, A subunit
BSR_inoc_85921_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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976..1146
DNA (171bp) protein (57aa)
Putative uncharacterized protein id=1856031 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Uncharacterized protein {ECO:0000313|EMBL:EEF68296.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
BSR_inoc_85921_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1150..1458
DNA (309bp) protein (103aa)
Electron transport complex protein RnfB n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6Z4_9FIRM
Electron transport complex protein RnfB {ECO:0000313|EMBL:EEF68297.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
BSR_inoc_85921_5
Clostridium sp. CAG:914, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1527..2213
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0003183896
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:CDE95281.1}; TaxID=1262846 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:914.;"
BSR_inoc_85921_6
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2269..3024
DNA (756bp) protein (252aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae ATCC 19414.;"
Type III pantothenate kinase n=1 Tax=Erysipelothrix rhusiopathiae ATCC 19414 RepID=E7FY07_ERYRH
coaX.2; type III pantothenate kinase
BSR_inoc_85921_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3087..4472
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y926_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEF67502.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
matE; MATE efflux family protein
BSR_inoc_85921_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4539..5768
DNA (1230bp) protein (410aa)
Transporter, major facilitator family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3L4_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEF69438.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Major Facilitator Superfamily transporter
BSR_inoc_85921_trna_1
unknown

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5846..5918
DNA (73bp)
transferRNA Asn
BSR_inoc_85921_trna_2
unknown

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5925..5998
DNA (74bp)
transferRNA Glu
BSR_inoc_85921_9
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6142..8241
DNA (2100bp) protein (700aa)
Transcriptional antiterminator n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IPE1_THETR
MtlR family PTS modulated transcriptional regulator
PTS modulated transcriptional regulator, MtlR family {ECO:0000313|EMBL:AEM77800.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter wiegelii Rt8.B1.;"
BSR_inoc_85921_10
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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8241..8855
DNA (615bp) protein (205aa)
L-fuculose phosphate aldolase {ECO:0000313|EMBL:CCJ34105.1}; EC=4.1.2.17 {ECO:0000313|EMBL:CCJ34105.1};; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
L-fuculose phosphate aldolase n=1 Tax=Caloramator australicus RC3 RepID=I7K938_9CLOT
class II aldolase/adducin family protein
BSR_inoc_85921_11
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8848..9144
DNA (297bp) protein (99aa)
Phosphotransferase system, galactitol-specific IIB component n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M315_ARTPP
ulaB; ascorbate-specific phosphotransferase enzyme IIB component
Phosphotransferase system, galactitol-specific IIB component {ECO:0000313|EMBL:ADX72173.1}; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
BSR_inoc_85921_12
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9156..10454
DNA (1299bp) protein (433aa)
PTS system transporter subunit IIC n=1 Tax=Collinsella sp. CAG:289 RepID=R7D1Q3_9ACTN
PTS system transporter subunit IIC {ECO:0000313|EMBL:CDD84205.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
PTS ascorbate transporter subunit IIC
BSR_inoc_85921_13
Collinsella sp. CAG:289, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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10601..11551
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:289 RepID=R7D359_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD84203.1}; TaxID=1262851 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:289.;"
phosphotriesterase family protein
BSR_inoc_85921_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11569..12420
DNA (852bp) protein (284aa)
Metal-dependent hydrolases of the beta-lactamase superfamily II n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASV5_9CLOT
Metal-dependent hydrolases of the beta-lactamase superfamily II {ECO:0000313|EMBL:EOC99741.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
metallo-beta-lactamase family protein
BSR_inoc_85921_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12443..12958)
DNA (516bp) protein (172aa)
CarD family transcriptional regulator n=8 Tax=Clostridium perfringens RepID=H7CS54_CLOPF
CarD family transcriptional regulator
Transcriptional regulator, CarD family {ECO:0000313|EMBL:EDS80816.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
BSR_inoc_85921_trna_4
unknown

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comp(13067..13140)
DNA (74bp)
transferRNA His
BSR_inoc_85921_16
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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13296..13670
DNA (375bp) protein (125aa)
Rubredoxin oxidoreductase (Desulfoferrodoxin) n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GGF9_EUBLK
rubredoxin oxidoreductase (desulfoferrodoxin)
Desulfoferrodoxin {ECO:0000313|EMBL:CDC26864.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
BSR_inoc_85921_17
Clostridium sp. CAG:253, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13712..14245)
DNA (534bp) protein (178aa)
Hydrolase NUDIX family n=1 Tax=Clostridium sp. CAG:253 RepID=R6LRV3_9CLOT
Hydrolase NUDIX family {ECO:0000313|EMBL:CDB90118.1}; TaxID=1262785 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:253.;"
nudix-family protein
BSR_inoc_85921_18
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14208..15161)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans 12-1B RepID=S2KY89_9FUSO
Dehydrogenase {ECO:0000313|EMBL:KEZ88144.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding
BSR_inoc_85921_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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15331..16941
DNA (1611bp) protein (537aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWS5_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EDM99611.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Na/Pi-cotransporter
BSR_inoc_85921_20
unknown

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comp(16938..17618)
DNA (681bp) protein (227aa)

This feature has no annotations

BSR_inoc_85921_trna_3
unknown

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17702..17783
DNA (82bp)
transferRNA Leu
BSR_inoc_85921_21
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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17879..18199
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Corynebacterium caspium RepID=UPI00037FA297
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EGR97683.1}; TaxID=1051006 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes SK182B-JCVI.;"
preprotein translocase subunit YajC
Displaying 25 items

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