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BSR_inoc_119086

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_119086_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(176..1189)
DNA (1014bp) protein (338aa)
gap; glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.-)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=4 Tax=Clostridium botulinum RepID=B2TPX5_CLOBB
BSR_inoc_119086_2
Eubacterium dolichum CAG:375, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1296..2192)
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=A8RFL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE23515.1}; TaxID=1263076 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium dolichum CAG:375.;"
BSR_inoc_119086_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2189..3127)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y305_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF69653.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
BSR_inoc_119086_4
unknown

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comp(3084..3341)
DNA (258bp) protein (86aa)

This feature has no annotations

BSR_inoc_119086_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3390..4325)
DNA (936bp) protein (312aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y308_9FIRM
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
BSR_inoc_119086_6
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4325..5275)
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002F51667
hypothetical protein
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=650150 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae (strain Fujisawa).;"
BSR_inoc_119086_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5379..6299)
DNA (921bp) protein (307aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Thioredoxin reductase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y313_9FIRM
thioredoxin-disulfide reductase
BSR_inoc_119086_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6278..7729)
DNA (1452bp) protein (484aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y314_9FIRM
bifunctional prolipoprotein diacylglyceryl transferase/phosphatase protein
BSR_inoc_119086_9
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7747..8697)
DNA (951bp) protein (317aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
HPr kinase/phosphorylase n=1 Tax=Eubacterium sp. 3_1_31 RepID=H1BPS4_9FIRM
HPr kinase/phosphorylase
BSR_inoc_119086_10
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8706..11531)
DNA (2826bp) protein (942aa)
UvrABC system protein A id=2005768 bin=GWE2_Firmicute_51_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
uvrA; excinuclease ABC subunit A
BSR_inoc_119086_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11632..12297)
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5C2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF68797.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
BSR_inoc_119086_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12312..13850)
DNA (1539bp) protein (513aa)
Efflux ABC transporter, permease protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3F2_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEF69492.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ABC transporter permease
BSR_inoc_119086_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13865..15343)
DNA (1479bp) protein (493aa)
PASTA domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3E7_9FIRM
PASTA domain protein {ECO:0000313|EMBL:EEF69511.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
protein PASTA domain-containing protein
BSR_inoc_119086_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15519..17492)
DNA (1974bp) protein (658aa)
UvrABC system protein B id=2005767 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Excinuclease ABC subunit B
BSR_inoc_119086_15
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17485..18996)
DNA (1512bp) protein (504aa)
Peptidase, S41 family {ECO:0000313|EMBL:EFW23510.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFW23510.1};; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
Peptidase, S41 family n=1 Tax=Solobacterium moorei F0204 RepID=E7MR17_9FIRM
ctpA; carboxy-terminal processing protease
BSR_inoc_119086_16
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(19084..20469)
DNA (1386bp) protein (462aa)
Putative uncharacterized protein (Fragment) id=4426664 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
Membrane-bound metallopeptidase
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_119086_17
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(20466..21365)
DNA (900bp) protein (300aa)
Cell division ABC transporter, permease protein FtsX id=4426666 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
cell division protein FtsX
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_119086_18
Erysipelothrix rhusiopathiae, Erysipelothrix, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21355..22047)
DNA (693bp) protein (231aa)
Putative cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EFY08715.1}; EC=3.6.3.- {ECO:0000313|EMBL:EFY08715.1};; TaxID=525280 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelothrix.;" source="Erysipelothrix rhusiopathiae ATCC 19414.;"
Cell division ATP-binding protein FtsE n=2 Tax=Erysipelothrix rhusiopathiae RepID=F5WV24_ERYRF
cell division ATP-binding protein FtsE
BSR_inoc_119086_19
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22118..22417)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF68744.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
Displaying 19 items

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