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BSR_inoc_181266_14

Organism: BSR_inoc_Firmicutes_35_7

near complete RP 48 / 55 MC: 4 BSCG 50 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: comp(11923..15753)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 1255.0
  • Bit_score: 1901
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' id=1888453 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 76.7
  • Coverage: 1255.0
  • Bit_score: 1936
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 1254.0
  • Bit_score: 1803
  • Evalue 0.0

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Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3831
ATGAGTATTAATAATTTCGCCTCGATGCAAGTAGGCTTAGCATCACCAGAGAGAATCCTTGAGTGGTCACATGGTGAAGTAAAGAAGCCAGAGACTATCAACTACCGATCACAAAAGCCTGAAAGAGATGGATTGTTTTGTGAGCGGATATTTGGACCATCGAAAGACTGGGAATGTTATTGTGGTAAGTACAAGAAGATTAGATATCAAGGAGTGATATGTGATCGTTGTGGTGTGGAGATTACTAAATCAAGTGTAAGGCGCGAGCGAATGGGTCATATCGAATTAGCAGCTCCTGTTGCTCACATTTGGTATTTGCGTGGTATTCCATCGCGGATGAGTTTGTTGTTGAATATGTCACCAAAATCATTGGAGGATGTGGTTTACTTTGTTTCTTGGGTTGTTACTGATCCAGGAAAGACAAAATTAGAATATAAACAGGTTATATCTGAAAGAGAATACCGTGAAGCTAATGCTATCTATGGTTATGGATCATTTAAAGCTGAAACAGGTGCTGAAGCAGTTAAGACGTTGCTTGAACAAATCGACTTAACAAAAGAAAGAGCGATCATTACTGATGATCTTAAAGGCGCTCAAGGGGATAAACGAAAGAAGTTGATCAAACGTTTAGAAACAGTTGAGGCTTTTATCAATTCAAGTAATAAGCCAGAGTGGATGGTATTGACGGTCTTGCCGGTAATACCACCAGATTTAAGACCAATGTTACAACTTGATGGTGGGCGTTTTGCGACAAGTGATCTTAATGATCTTTATCGTCGGGTAATCACAAGAAATAATCGTTTAAAGAAATTATTAGAGTTAGGTACGCCCAGTATTATCGTTCAAAATGAAAAGCGTATGTTGCAGGAAGCTGTCGATGCTTTGATCGATAATGGTCGTCGTAGTAAAGCGATAACTGGCGCAGGCGGTAGAGCCCTTAAATCTTTATCACATAGTTTAAAAGGTAAACAAGGACGTTTCCGTCAAAATCTATTAGGAAAGCGTGTTGACTTTTCTGGACGTTCAGTAATCGCTGTAGGTCCAAATTTAAAGATGTATGAGTGTGGATTACCAAGAGAGATGGCGATCCAATTGTTTAAACCATTTGTGATCAACGAGATCGTAAATCGTGGTGTAGCAAGTAATCCAAAAACTGCTGAGAAGTTGATCGATCGTCAAGATGCTCGCGTTTGGGACATTGTTGAAGATATCGTCGAGTCTCGTCCTGTATTATTAAATAGAGCTCCTACATTACATCGTTTAGGAATTCAAGCTTTTAAACCGAAACTTGTAGAGGGAAGAGCGATAAGATTACACCCACTGGTAACTCCAGCATTTAATGCTGATTTTGATGGTGACCAAATGGCGGTACATGTACCCTTATCAGAAGAGGCCTGTGCTGAAGCTGAAATCTTAATGCTTGGATCTAATAACATTCTTGGTCCAAAAGATGGGAAGCCAATCGTTACGCCATCACAAGATATGGTTTTGGGTAATTTCTATTTAAACATGGAAGAGACAAAAGCTGAATTCTTTGCTAAAGCTAAACAGTTTGAAGATCTTAATGAGTTAGAAGAAGCAAAATTATGGCATAGGTATGGAGAAAGTGAAGGCTCTATCTATCGTAGCGCTAATGAAGCACTGATAGCTTATGAGAATAAGAATGCTCATCTTCATACTCGGATAGCTGTTAAAGCATCGTCATTAAAAAAATCAACCTTTACGGCTGAACAAAATGGTAAATTGTTGATCACGACGATCGGCAAGTTAATCTTTAATGAGATATTCCCTAGTGATTTCCCATATTTGAATGAAGCTAATGCGTCTGATTTTATTAAGACCCCTGATCGGTATTTTGTAGATTATAATACCGATATTAAGGCATATATTGAAAATATGCCGATAAGTAAAGACTTCAAAAAAGCGAATTTAAGCTTAGTAATCGCTGAAGTATTTAAACGTTATCGTAATCAGAGAACATCACAAATCTTAGATAAGATCAAGGATATGGGATTTAAGTACTCAACTGTTGCTGGTATTACAGTTTCATTGAGTGATATCAATGTTGCTCCTAATAAATATACGTATATTGAAAAGGGAAAAGATAAAGCTAATGAACTTAATCGACTTTACCAAAGAGGTAAATTGACAGCTCCAGAGTGGGAAAGACATCTAACTTCACTATGGGGTGGTATTAAAGATAGTATTGGGAAAGAAGTCATGGATAATTTACCTCGTAAAAATCCTATAAATATGATGGCTGTCTCAGGTGCTCGTGGTAATTCTTCGCACTTTACTCAATTGGCTGGTATGCGTGGTTTGATGGGTAAACCAACACAGTCTAAATCAAAGAAAGAATACCAATCTTCAATCATTGAGGTGCCTATCTATTCATCATTTAGAGAAGGTTTGAATGTGTCCGAGTTCTTTATTTCAACACATGGCGTTAGAAAAGGATTAACTGATACAGCATTAAAGACGGCTGAATCTGGTTATTTAACAAGACGTTTAGTTGATGTTGCCCAGGATGTGATCATAACCGAGGAAGATTGTGAGACTGATCGCGGTTATCTTATAGAAGCTTTAGTTGATCACAAAGAAAATTCAGTGATTGAAAGTTTCTATGATCGTATTGTTGGACGCTATGTTAAAGAAGATGTTTATGATCCAAATACTAATGAATTGATCATAGCAAGCGATGAGTTTATCGATGATGATATAGCGACTAAGATCGTAGATGCAAAAATCGAAAAGATTTACATTCGTAATATCTTTACTTGTGATTCTACCTATGGTGTATGTAAGAAGTGTTATGGTCGTAATATTGCAACAGGTAAGATCGTTGAAGTTGGGGAGGCTGTTGGTATAATGGCTGCTCAATCAATCGGTGAACCAGGAACGCAGTTAACCATGCGGAACTTCCATACTGGAGGTGTTGCTGGTGGCAGTGATATCACGCAAGGTTTGCCTAGGGTTGAAGAATTATTTGAAGCTAGAGACCCTAAGCATCGTGCTACGATAGCTAAGATCAGTGGAGAAATAATTGAGATTAGTGAAAATGAAAACAATAATGGTTATAAGATCATGGTCGCTAATGAGAATGAAACGATCGAACATAAGACTGATCATAATCAAACCATAAGATCATGGTTAAAAGTTGGCTCAATGGTCAACGCAGGTGATAAACTTACTGAAGGACCGGTAGCTCCTAAGGAATTACTAGAAGTTGCTGGAGTGAATACTGTTCATAACTATATTTTGAAAGAAGTACAAAAAGTATATGGCGCACAAGGAATTGGTATTTCCGATAAACATATCGAAGTTATCATCTCGCAAATGTTGAGAAAGGTTATTGTTATCAACCCTGGTGATTCTAACTTGAGTGCAGGTATTCAGATCAGTTTACCTAATATAACTAACCTAAATCGTGATATATTACTTGAAGGTAAGAATCCAGCAACATTTGGACCAACATTGTTAGGTATTTCGAAAGCTTCAGTTGAAACAGATTCCTTCTTATCGGCGGCCAGTTTCCAAGAAACAACAAAAGTATTAACGGACGCTGCTGTAAAAGGAAAGGTTGATCGTTTACTTGGTTTAAAAGAGAATGTTATTATAGGTAAAATGATACCGGCTGGAACTGGATCAAATGCAGATAGAGCATCAACAAAAGCAATCATTGAGTTAGCTGCACAGTTAAGAGCAGAGCGTGAAGCGCGCAATTTTAAAGAAGAAGATGTTATGCTGGAAGACAGTGATAACTACGATGAAAATGCGATAATAGTTGAAGAGAAACCTGCTGTAGAAACGCAAGAAGAAATAAGCGATTAA
PROTEIN sequence
Length: 1277
MSINNFASMQVGLASPERILEWSHGEVKKPETINYRSQKPERDGLFCERIFGPSKDWECYCGKYKKIRYQGVICDRCGVEITKSSVRRERMGHIELAAPVAHIWYLRGIPSRMSLLLNMSPKSLEDVVYFVSWVVTDPGKTKLEYKQVISEREYREANAIYGYGSFKAETGAEAVKTLLEQIDLTKERAIITDDLKGAQGDKRKKLIKRLETVEAFINSSNKPEWMVLTVLPVIPPDLRPMLQLDGGRFATSDLNDLYRRVITRNNRLKKLLELGTPSIIVQNEKRMLQEAVDALIDNGRRSKAITGAGGRALKSLSHSLKGKQGRFRQNLLGKRVDFSGRSVIAVGPNLKMYECGLPREMAIQLFKPFVINEIVNRGVASNPKTAEKLIDRQDARVWDIVEDIVESRPVLLNRAPTLHRLGIQAFKPKLVEGRAIRLHPLVTPAFNADFDGDQMAVHVPLSEEACAEAEILMLGSNNILGPKDGKPIVTPSQDMVLGNFYLNMEETKAEFFAKAKQFEDLNELEEAKLWHRYGESEGSIYRSANEALIAYENKNAHLHTRIAVKASSLKKSTFTAEQNGKLLITTIGKLIFNEIFPSDFPYLNEANASDFIKTPDRYFVDYNTDIKAYIENMPISKDFKKANLSLVIAEVFKRYRNQRTSQILDKIKDMGFKYSTVAGITVSLSDINVAPNKYTYIEKGKDKANELNRLYQRGKLTAPEWERHLTSLWGGIKDSIGKEVMDNLPRKNPINMMAVSGARGNSSHFTQLAGMRGLMGKPTQSKSKKEYQSSIIEVPIYSSFREGLNVSEFFISTHGVRKGLTDTALKTAESGYLTRRLVDVAQDVIITEEDCETDRGYLIEALVDHKENSVIESFYDRIVGRYVKEDVYDPNTNELIIASDEFIDDDIATKIVDAKIEKIYIRNIFTCDSTYGVCKKCYGRNIATGKIVEVGEAVGIMAAQSIGEPGTQLTMRNFHTGGVAGGSDITQGLPRVEELFEARDPKHRATIAKISGEIIEISENENNNGYKIMVANENETIEHKTDHNQTIRSWLKVGSMVNAGDKLTEGPVAPKELLEVAGVNTVHNYILKEVQKVYGAQGIGISDKHIEVIISQMLRKVIVINPGDSNLSAGIQISLPNITNLNRDILLEGKNPATFGPTLLGISKASVETDSFLSAASFQETTKVLTDAAVKGKVDRLLGLKENVIIGKMIPAGTGSNADRASTKAIIELAAQLRAEREARNFKEEDVMLEDSDNYDENAIIVEEKPAVETQEEISD*