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BSR_inoc_181266

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_181266_1
unknown

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comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

BSR_inoc_181266_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(93..563)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI00030A47C6
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
SSU ribosomal protein S7P
BSR_inoc_181266_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(591..1010)
DNA (420bp) protein (140aa)
30S ribosomal protein S12 n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y6A9_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
30S ribosomal protein S12
BSR_inoc_181266_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1228..2019)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002E47018
Uncharacterized protein {ECO:0000313|EMBL:EEU94901.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
conserved protein of unknown function
BSR_inoc_181266_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2048..3247)
DNA (1200bp) protein (400aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Putative N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y3B1_9FIRM
N-acetylglucosamine-6-phosphate deacetylase
BSR_inoc_181266_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3310..4047)
DNA (738bp) protein (246aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7X2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS12625.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC transporter
BSR_inoc_181266_7
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4047..4820)
DNA (774bp) protein (258aa)
ABC transporter, permease protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P7X3_9FIRM
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:ETP71740.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
BSR_inoc_181266_8
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4820..5659)
DNA (840bp) protein (280aa)
UPI0002F3032D related cluster n=1 Tax=unknown RepID=UPI0002F3032D
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EDS12629.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
BSR_inoc_181266_9
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6091..7029)
DNA (939bp) protein (313aa)
Oligopeptide ABC transporter, ATP-binding protein OppF n=1 Tax=Solobacterium moorei F0204 RepID=E7MP50_9FIRM
Oligopeptide ABC transporter, ATP-binding protein OppF {ECO:0000313|EMBL:EFW24231.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase
BSR_inoc_181266_10
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(7022..8104)
DNA (1083bp) protein (361aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PW62_9FUSO
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:EHO79916.1}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
BSR_inoc_181266_11
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(8115..9137)
DNA (1023bp) protein (341aa)
ABC transporter, permease protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MP52_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EFW24233.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
BSR_inoc_181266_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9138..10100)
DNA (963bp) protein (321aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease components n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BVS6_9CLOT
ABC-type dipeptide/oligopeptide/nickel transport system, permease components {ECO:0000313|EMBL:EOR21142.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
binding-protein-dependent transport system inner membrane protein
BSR_inoc_181266_13
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10146..11774)
DNA (1629bp) protein (543aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Turicibacter sp. HGF1 RepID=F0HIW6_9FIRM
Bacterial extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:EFF62502.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis PC909.;"
family 5 extracellular solute-binding protein
BSR_inoc_181266_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11923..15753)
DNA (3831bp) protein (1277aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
DNA-directed RNA polymerase subunit beta' id=1888453 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
rpoC; DNA-directed RNA polymerase subunit beta'
BSR_inoc_181266_15
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15767..17863)
DNA (2097bp) protein (699aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y2T9_9FIRM
Displaying 15 items

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