ggKbase home page

BSR_inoc_197894_3

Organism: BSR_inoc_Firmicutes_35_7

near complete RP 48 / 55 MC: 4 BSCG 50 / 51 MC: 8 ASCG 14 / 38 MC: 3
Location: comp(4525..5625)

Top 3 Functional Annotations

Value Algorithm Source
DNA replication and repair protein RecF id=2050283 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 43.3
  • Coverage: 363.0
  • Bit_score: 315
  • Evalue 3.80e-83
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 366.0
  • Bit_score: 288
  • Evalue 7.00e-75
recF; DNA replication and repair protein RecF similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 361.0
  • Bit_score: 270
  • Evalue 5.20e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1101
ATGATCATAAAGAATATCAAACTACACAATTTTCGTAACTACACGGATTGTAGCGTGCAGCTTGCTGAAAACATTAATGTTTTTATTGGGGATAATGCTCAAGGTAAGACGAATTTTCTTGAAAGTGTCGCTTTTATCTCGACAACAAGATCGTTTCGCACAAACGATGACAAAGCGATGATAAATAATTTGAAAGAAAAGTCAGCAGTTATCGTTACGATAATAGATAATGATTCCAAGCTTAAATTAACTGGACAACTTTTTAAAGAGGGTAAAAGACTCTTAATCCAAAGCCAAGCCGTTAAAAAAAGTAGTGAGTTTATTGGGATCTTAAACGCGGTAGTTTTCTCACCAGATGATCTAGAGTTGTTTAATGGTGCTCCAAGACTAAGGAGAAGAATGTGTGATCTAGAGATTGGGAAGATAAACAAGGAATATATGGGTTATCTAAATGATTATCAAAAAACACTAAAGGAACGAAATAATTTTCTAAAGTCAAGCAGTAACGATGATATTTATTTAAATGTCATAACTCAGCAATTAATTGAGTATCAAATACCAATTATAAAGTATAGAAGGAAATTTATTGAGTTTATGAATGGTGTTATTACAAAAAGATACCAAGAAATTGCAGTAAGTGATGAAGAGATCTTTGTAGAATATTTATCACCAATTGATAGCGAAGAAGACATTCGAGAAGCTTTGAAACAGCGTTACTTAAAAAGTACGGTAAGTGATAAGAACCAAAGACAGACACAGGTTGGTATCCATAAGGATGATCTTAAGTTTTATCTTAATGGTAATGGTATTGGTGATTTCGCCTCACAAGGACAAAAGAGAATGTTGGTTTTAGCGCTGAAGGTAGTATTAATCGATTATATATATAAGCAATGTAAAAAATATCCAGTATTGTTACTAGATGATGTTTTATCAGAATTGGATATAACAAGGAGAAGGTCGTTGTTTGCTTTAATACCCAAAGAAGTGCAAACGATCATAACGACAACTGATATTAAAGATATACAGTCTTTTTTACCTAAAGGATCAAGGATATTTAAGATCAATGACGGTATGATCATAGAGAACAAGGAGATGATATAA
PROTEIN sequence
Length: 367
MIIKNIKLHNFRNYTDCSVQLAENINVFIGDNAQGKTNFLESVAFISTTRSFRTNDDKAMINNLKEKSAVIVTIIDNDSKLKLTGQLFKEGKRLLIQSQAVKKSSEFIGILNAVVFSPDDLELFNGAPRLRRRMCDLEIGKINKEYMGYLNDYQKTLKERNNFLKSSSNDDIYLNVITQQLIEYQIPIIKYRRKFIEFMNGVITKRYQEIAVSDEEIFVEYLSPIDSEEDIREALKQRYLKSTVSDKNQRQTQVGIHKDDLKFYLNGNGIGDFASQGQKRMLVLALKVVLIDYIYKQCKKYPVLLLDDVLSELDITRRRSLFALIPKEVQTIITTTDIKDIQSFLPKGSRIFKINDGMIIENKEMI*