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BSR_inoc_197894

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_197894_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(122..2587)
DNA (2466bp) protein (822aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
DNA gyrase subunit A n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y585_9FIRM
gyrA; DNA gyrase subunit A
BSR_inoc_197894_2
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(2599..4524)
DNA (1926bp) protein (642aa)
DNA gyrase subunit B id=4223726 bin=GWF2_Firmicute_51_9 species=Erysipelothrix rhusiopathiae genus=Erysipelothrix taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
gyrB; DNA gyrase subunit B
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_197894_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4525..5625)
DNA (1101bp) protein (367aa)
DNA replication and repair protein RecF id=2050283 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
recF; DNA replication and repair protein RecF
BSR_inoc_197894_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5622..5825)
DNA (204bp) protein (68aa)
S4 domain protein YaaA n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5K4_9FIRM
S4 domain protein YaaA {ECO:0000313|EMBL:EEF68728.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
S4-like RNA binding protein
BSR_inoc_197894_5
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(5965..7104)
DNA (1140bp) protein (380aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta id=2050279 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_197894_6
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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comp(7250..8611)
DNA (1362bp) protein (454aa)
Chromosomal replication initiator protein DnaA id=2050277 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
dnaA; chromosomal replication initiation protein
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_197894_7
unknown

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8857..9000
DNA (144bp) protein (48aa)

This feature has no annotations

BSR_inoc_197894_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9248..9622
DNA (375bp) protein (125aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
Ribonuclease P protein component n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5L4_9FIRM
rnpA; ribonuclease P (protein C5)
BSR_inoc_197894_9
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

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9609..10493
DNA (885bp) protein (295aa)
Putative uncharacterized protein id=3720120 bin=GWF2_Firmicute_51_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
stage III sporulation protein J
Tax=GWF2_Firmicutes_51_9_curated
BSR_inoc_197894_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10496..11110
DNA (615bp) protein (205aa)
Putative uncharacterized protein id=3720119 bin=GWF2_Firmicute_51_9 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
R3H domain protein {ECO:0000313|EMBL:EEF68740.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
jag; Jag protein
BSR_inoc_197894_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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11149..11745
DNA (597bp) protein (199aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Peptidyl-tRNA hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QR98_9FIRM
peptidyl-tRNA hydrolase
BSR_inoc_197894_12
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

11738..15118
DNA (3381bp) protein (1127aa)
Putative uncharacterized protein id=2188883 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
mfd; transcription-repair coupling factor
Tax=GWF2_Firmicutes_51_9_curated
Displaying 12 items

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