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BSR_inoc_135731

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_135731_1
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2..919
DNA (918bp) protein (306aa)
Aspartate--tRNA ligase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GAH7_9DELT
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KHK03045.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
aspS; aspartyl-tRNA synthetase
BSR_inoc_135731_2
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

916..1428
DNA (513bp) protein (171aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
Peptide deformylase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q8E4_9DELT
def; peptide deformylase
BSR_inoc_135731_3
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1401..2450
DNA (1050bp) protein (350aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Methionyl-tRNA formyltransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XT39_DESMR
fmt; methionyl-tRNA formyltransferase
BSR_inoc_135731_4
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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2447..3412
DNA (966bp) protein (322aa)
Hypothetical membrane protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XT40_DESMR
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH73522.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_135731_5
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3409..4872
DNA (1464bp) protein (488aa)
tRNA/rRNA cytosine-C5-methylase n=1 Tax=Desulfovibrio sp. U5L RepID=I2PX70_9DELT
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:KHK03049.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
rsmB; rRNA (cytosine-C(5)-)-methyltransferase
BSR_inoc_135731_6
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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4989..5927
DNA (939bp) protein (313aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Aspartate carbamoyltransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XTP8_DESMR
pyrB; aspartate carbamoyltransferase catalytic subunit
BSR_inoc_135731_7
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5931..7274
DNA (1344bp) protein (448aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Dihydroorotase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XTP7_DESMR
pyrC; dihydroorotase
BSR_inoc_135731_8
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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7271..8590
DNA (1320bp) protein (440aa)
Metal dependent phosphohydrolase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q8C0_9DELT
tRNA nucleotidyltransferase {ECO:0000313|EMBL:KHK03093.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
BSR_inoc_135731_9
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8812..9081)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=2 Tax=Desulfovibrio magneticus RepID=C4XSI0_DESMR
fliQ; flagellar biosynthetic protein FliQ
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:KHK03006.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
BSR_inoc_135731_10
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9105..9782)
DNA (678bp) protein (226aa)
flagellar biosynthesis protein FliP n=1 Tax=Desulfovibrio longus RepID=UPI0003B36F56
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:EIG52167.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
fliP; flagellar biosynthesis protein FliP
BSR_inoc_135731_11
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9823..10179)
DNA (357bp) protein (119aa)
Flagellar biosynthetic protein FliO n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q595_9DELT
Flagellar biosynthetic protein FliO {ECO:0000313|EMBL:EHJ48418.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
flagellar protein FliO
BSR_inoc_135731_12
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10172..10720)
DNA (549bp) protein (183aa)
Flagellar motor switch protein FliN n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q594_9DELT
Flagellar motor switch protein FliN {ECO:0000313|EMBL:EHJ48417.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
fliN; putative flagellar motor switch protein FliN
BSR_inoc_135731_13
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10785..11372)
DNA (588bp) protein (196aa)
Flagellar FliL protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XSH6_DESMR
fliL; flagellar FliL protein
Flagellar FliL protein {ECO:0000313|EMBL:BAH78108.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_135731_14
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11431..12129)
DNA (699bp) protein (233aa)
Alanine racemase domain protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JV97_DESFR
Alanine racemase domain protein {ECO:0000313|EMBL:EFL51691.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
BSR_inoc_135731_15
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12187..13098)
DNA (912bp) protein (304aa)
GTPase Era n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JV96_DESFR
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
era; GTP-binding protein Era
BSR_inoc_135731_16
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

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comp(13407..14057)
DNA (651bp) protein (217aa)
Cephalosporin hydroxylase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WYU5_9NOST
cephalosporin hydroxylase
Cephalosporin hydroxylase {ECO:0000313|EMBL:AFZ24971.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
BSR_inoc_135731_17
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14223..15104)
DNA (882bp) protein (294aa)
ATP phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000255|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000255|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000255|HAMAP-Rule:MF_00079};; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
ATP phosphoribosyltransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=HIS1_DESMR
hisG; ATP phosphoribosyltransferase
BSR_inoc_135731_18
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15106..15480)
DNA (375bp) protein (125aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021};; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JV42_DESFR
hisI; phosphoribosyl-AMP cyclohydrolase
BSR_inoc_135731_19
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15598..16032)
DNA (435bp) protein (145aa)
PilT protein-like protein (Modular protein) id=3707857 bin=GWF2_Lentisphaerae_49_21 species=Microcystis sp. T1-4 genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
hypothetical protein
Tax=GWF2_Lentisphaerae_49_21_curated
BSR_inoc_135731_20
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(16029..16301)
DNA (273bp) protein (91aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Desulfovibrio sp. U5L RepID=I2PXH6_9DELT
putative transcriptional regulator
Tax=RBG_16_NC10_65_8_curated
BSR_inoc_135731_21
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16364..17206)
DNA (843bp) protein (281aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JV45_DESFR
ribosomal RNA large subunit methyltransferase N
Displaying 21 items

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