ggKbase home page

BSR_inoc_231362

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_231362_1
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..735
DNA (735bp) protein (245aa)
Fis family transcriptional regulator n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00036606DA
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ADU63805.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
BSR_inoc_231362_2
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1014..1484
DNA (471bp) protein (157aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E7J8_9GAMM
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EGV27931.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
hypothetical protein
BSR_inoc_231362_3
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1481..2326)
DNA (846bp) protein (282aa)
PHP domain protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNV9_DESMR
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:BAH77460.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_231362_4
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2508..3752
DNA (1245bp) protein (415aa)
Methyltransferase type 11 n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SPG9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:AIE19320.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
type 11 methyltransferase
BSR_inoc_231362_5
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3931..4809)
DNA (879bp) protein (293aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNA2_DESMR
rmlA; glucose 1-phosphate thymidylyltransferase
BSR_inoc_231362_6
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4935..5759
DNA (825bp) protein (275aa)
Molybdenum cofactor synthesis domain containing protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VGX6_9DELT
Molybdenum cofactor biosynthesis protein MoaB {ECO:0000313|EMBL:KHK01131.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
molybdenum cofactor synthesis protein
BSR_inoc_231362_7
unknown

Not on your lists

comp(5907..6047)
DNA (141bp) protein (47aa)

This feature has no annotations

BSR_inoc_231362_8
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6058..9507
DNA (3450bp) protein (1150aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain RCH1).;"
UvrD/REP helicase n=1 Tax=Desulfovibrio vulgaris (strain RCH1) RepID=E3IPQ9_DESVR
UvrD/REP helicase
BSR_inoc_231362_9
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9516..9716)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YVK0_DESAF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ48736.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
BSR_inoc_231362_10
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9824..10618
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q416_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KHK01611.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
BSR_inoc_231362_11
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10615..11133
DNA (519bp) protein (173aa)
Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNU2_DESMR
Adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:KHK01610.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
cobU; adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase
BSR_inoc_231362_12
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11134..12150
DNA (1017bp) protein (339aa)
Phosphoesterase RecJ domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q813_9DELT
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:EHJ47707.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
DHH family protein
BSR_inoc_231362_13
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12310..13710)
DNA (1401bp) protein (467aa)
Serine/threonine protein kinase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q814_9DELT
Serine/threonine protein kinase {ECO:0000313|EMBL:EHJ47708.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
serine/threonine-protein kinase
BSR_inoc_231362_14
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13714..14568)
DNA (855bp) protein (285aa)
Putative phosphoesterase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6FN47_9DELT
phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:BAH77455.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_231362_15
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14675..15391)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XNV1_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH77452.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_231362_16
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15563..16192)
DNA (630bp) protein (210aa)
Tetratricopeptide repeat protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q424_9DELT
TPR domain protein {ECO:0000313|EMBL:KHK01603.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
BSR_inoc_231362_17
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16334..16702)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q820_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EHJ47714.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
BSR_inoc_231362_18
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16704..17582)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K2N2_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL49133.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
BSR_inoc_231362_19
CG_Desulfovib_01, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17686..17874)
DNA (189bp) protein (63aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1K2N3_DESFR
ferredoxin
Tax=CG_Desulfovib_01
BSR_inoc_231362_20
unknown

Not on your lists

18107..18259
DNA (153bp) protein (51aa)

This feature has no annotations

BSR_inoc_231362_21
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18334..19128)
DNA (795bp) protein (265aa)
Nitroreductase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JVH9_DESFR
Nitroreductase {ECO:0000313|EMBL:EFL51773.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
nitroreductase
BSR_inoc_231362_22
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19150..19587)
DNA (438bp) protein (146aa)
Thioredoxin n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q6X8_9DELT
Thioredoxin {ECO:0000313|EMBL:EHJ48461.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
trxA; thioredoxin
BSR_inoc_231362_23
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19694..20464)
DNA (771bp) protein (257aa)
CBS domain containing protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q561_9DELT
CBS domain containing protein {ECO:0000313|EMBL:EHJ48384.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
BSR_inoc_231362_24
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20650..21252
DNA (603bp) protein (201aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
Shikimate kinase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JXL3_DESFR
aroK; shikimate kinase I
BSR_inoc_231362_25
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21249..21836
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q7T5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EHJ47394.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
BSR_inoc_231362_26
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22014..22490
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q4M0_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIG54726.1}; Flags: Precursor;; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
BSR_inoc_231362_27
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22612..23319)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SN73_9DELT
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIX15173.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
helicase
BSR_inoc_231362_28
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23982..26432
DNA (2451bp) protein (817aa)
Glycosyl transferase group 1 n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YUN1_DESAF
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:EGJ48985.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus str. Walvis Bay.;"
BSR_inoc_231362_29
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26791..27921
DNA (1131bp) protein (377aa)
Putative ABC transporter permease protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XJV1_DESMR
Putative ABC transporter, permease protein {ECO:0000313|EMBL:KHK01274.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
ABC transporter permease
BSR_inoc_231362_30
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27925..28659
DNA (735bp) protein (245aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GK62_9DELT
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:EKO37411.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
ABC transporter ATP-binding protein
Displaying items 1-30 of 40 in total

View Taxonomy