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BSR_inoc_200619

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_200619_1
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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24..680
DNA (657bp) protein (219aa)
Hydrogenase nickel incorporation protein HypB n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XS27_DESMR
hypB; hydrogenase nickel incorporation protein HypB
Hydrogenase nickel incorporation protein HypB {ECO:0000313|EMBL:BAH75683.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_200619_2
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

819..1070
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VBI3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPR41813.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
hypothetical protein
BSR_inoc_200619_3
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1113..3437)
DNA (2325bp) protein (775aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYL1_DESFR
PAS domain-containing protein
BSR_inoc_200619_4
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3930..4214)
DNA (285bp) protein (95aa)
30S ribosomal protein S20 n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=RS20_DESMR
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
BSR_inoc_200619_5
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4320..6413)
DNA (2094bp) protein (698aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
Glycine--tRNA ligase beta subunit n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q136_9DELT
glyS; glycyl-tRNA synthetase beta chain
BSR_inoc_200619_6
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6430..7299)
DNA (870bp) protein (290aa)
Glycine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104892}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00254, ECO:0000256|SAAS:SAAS00104898};; Glycyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00254}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
Glycine--tRNA ligase alpha subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q3V8_9DELT
glyQ; glycyl-tRNA synthetase subunit alpha
BSR_inoc_200619_7
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7346..8089)
DNA (744bp) protein (248aa)
DNA repair protein RecO n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q3V9_9DELT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
DNA repair protein
BSR_inoc_200619_8
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8240..9706)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q139_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIG53495.1}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
XRE family transcriptional regulator
BSR_inoc_200619_9
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9854..11026)
DNA (1173bp) protein (391aa)
Chaperone SurA {ECO:0000256|SAAS:SAAS00043023}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
SurA domain protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JRI5_DESFR
peptidyl-prolyl cis-trans isomerase
BSR_inoc_200619_10
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11040..12743)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XS48_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH75570.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_200619_11
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12749..16216)
DNA (3468bp) protein (1156aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Transcription-repair-coupling factor n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q142_9DELT
mfd; transcription-repair coupling factor
BSR_inoc_200619_12
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16361..16837)
DNA (477bp) protein (159aa)
CheW protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JRI8_DESFR
CheW protein {ECO:0000313|EMBL:EFL53189.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
cheW; chemotaxis protein CheW
BSR_inoc_200619_13
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16960..17439)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JRI9_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL53190.1}; Flags: Precursor;; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
BSR_inoc_200619_14
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17512..18723)
DNA (1212bp) protein (404aa)
Leucyl aminopeptidase (Aminopeptidase T) n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GTH7_9DELT
Leucyl aminopeptidase (Aminopeptidase T) {ECO:0000313|EMBL:EKO40256.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
M29 family peptidase
BSR_inoc_200619_15
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18867..20024
DNA (1158bp) protein (386aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Putative sensor histidine kinase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XLL2_DESMR
sensor histidine kinase
BSR_inoc_200619_16
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20328..20546
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Desulfovibrio RepID=B8DQF6_DESVM
infA; translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
BSR_inoc_200619_17
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20608..22215)
DNA (1608bp) protein (536aa)
Beta-Casp domain protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q3W8_9DELT
Metallo-beta-lactamase family protein, RNA-specific {ECO:0000313|EMBL:KHK04055.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
hypothetical protein
BSR_inoc_200619_18
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22387..23043
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VZ27_DESAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU62803.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
BSR_inoc_200619_19
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

23052..23546
DNA (495bp) protein (165aa)
GCN5-related N-acetyltransferase id=4947517 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acetyltransferase
Tax=CG_Elusi_03
BSR_inoc_200619_20
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23516..25519)
DNA (2004bp) protein (668aa)
UvrABC system protein C n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYQ8_DESFR
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
UvrABC system protein C
BSR_inoc_200619_21
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25527..26063)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JYR7_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL50487.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein
BSR_inoc_200619_22
Desulfovibrio gigas, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26326..26970)
DNA (645bp) protein (215aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1121448 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio gigas DSM 1382 = ATCC 19364.;"
Probable transaldolase n=1 Tax=Desulfovibrio gigas DSM 1382 = ATCC 19364 RepID=T2GCX9_DESGI
tal; putative translaldolase
BSR_inoc_200619_23
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27110..27415)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XSJ3_DESMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH75690.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_inoc_200619_24
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27449..27940)
DNA (492bp) protein (164aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JRG0_DESFR
Uncharacterized protein {ECO:0000313|EMBL:AIE19083.1}; TaxID=159290 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
BSR_inoc_200619_25
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27949..29118)
DNA (1170bp) protein (390aa)
Aminotransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XSJ5_DESMR
LL-diaminopimelate aminotransferase
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:KHK04334.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
BSR_inoc_200619_26
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29283..30182
DNA (900bp) protein (300aa)
Tyrosine recombinase XerD n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GHV2_9DELT
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
Tyrosine recombinase xerC
BSR_inoc_200619_27
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30190..32883
DNA (2694bp) protein (898aa)
Nucleotidyltransferase n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XSJ7_DESMR
tRNA nucleotidyltransferase, A-adding {ECO:0000313|EMBL:KHK04331.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
nucleotidyltransferase
BSR_inoc_200619_28
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33242..34552
DNA (1311bp) protein (437aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q3T5_9DELT
BSR_inoc_200619_29
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34577..35473
DNA (897bp) protein (299aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Desulfovibrio longus RepID=UPI0003B5AA24
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase
Displaying 29 items

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