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BSR_inoc_143782

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_143782_1
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3..719)
DNA (717bp) protein (239aa)
Regulatory protein LuxR n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RU63_SPHGB
regulatory protein LuxR
Regulatory protein LuxR {ECO:0000313|EMBL:ADY12149.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_143782_2
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(1618..2088)
DNA (471bp) protein (157aa)
Helix-turn-helix domain protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RU55_SPHGB
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADY12141.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_143782_3
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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2267..2695
DNA (429bp) protein (143aa)
Nucleotidyltransferase substrate binding protein, HI0074 family n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY08_SPHGB
nucleotidyltransferase substrate binding protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_143782_4
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2679..3005
DNA (327bp) protein (109aa)
DNA polymerase beta domain protein region n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY07_SPHGB
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:ADY12431.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_inoc_143782_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3191..4210
DNA (1020bp) protein (340aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P375_AZOS1
periplasmic binding protein/LacI transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:BAI75245.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
BSR_inoc_143782_6
bacterium UASB14, Bacteria

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4280..5779
DNA (1500bp) protein (500aa)
ABC transporter, ATP-binding protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RMY4_9PROT
ABC transporter component {ECO:0000313|EMBL:GAK51680.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
simple sugar transport system ATP-binding protein
BSR_inoc_143782_7
bacterium UASB14, Bacteria

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5796..6824
DNA (1029bp) protein (343aa)
ABC transporter permease n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C408_9RHIZ
Putative amino acid or sugar ABC transport system, permease protein {ECO:0000313|EMBL:GAK51679.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
monosaccharide ABC transporter membrane protein, CUT2 family
BSR_inoc_143782_8
bacterium UASB14, Bacteria

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6827..7810
DNA (984bp) protein (328aa)
araH2; ribose/xylose/arabinose/galactoside ABC-type transport system protein (EC:3.6.3.17)
Ribose/xylose/arabinose/galactoside ABC-type transport system protein n=1 Tax=Dinoroseobacter shibae (strain DFL 12) RepID=A8LNW6_DINSH
Rhamnose transport system permease protein {ECO:0000313|EMBL:GAK51678.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
BSR_inoc_143782_9

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7930..8946
DNA (1017bp) protein (339aa)
Transcriptional regulator, LacI family n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R2I3_SPISS
Marine sediment metagenome DNA, contig: S01H4_C00233 {ECO:0000313|EMBL:GAG68306.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
LacI family transcriptional regulator
BSR_inoc_143782_10
Mesotoga prima, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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8943..9764
DNA (822bp) protein (274aa)
Membrane complex biogenesis protein, BtpA family n=1 Tax=Mesotoga prima MesG1.Ag.4.2 RepID=I2F731_9THEM
membrane complex biogenesis protein, BtpA family
Membrane complex biogenesis protein, BtpA family {ECO:0000313|EMBL:AFK07734.1}; TaxID=660470 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga prima MesG1.Ag.4.2.;"
BSR_inoc_143782_11
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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9806..10309
DNA (504bp) protein (168aa)
Ureidoglycolate hydrolase n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9KBY9_THENN
Ureidoglycolate hydrolase
Ureidoglycolate hydrolase {ECO:0000313|EMBL:ACM22535.1}; TaxID=309803 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E).;"
BSR_inoc_143782_12
GWA2_RIF03_38_11_curated, RIF3, Bacteria

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10327..11259
DNA (933bp) protein (311aa)
PfkB domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RXK1_FERPA
PfkB domain protein
Tax=GWA2_RIF03_38_11_curated
BSR_inoc_143782_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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11656..12666
DNA (1011bp) protein (337aa)
Transcriptional regulator n=1 Tax=Dorea sp. CAG:317 RepID=R6WS35_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDD06771.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
transcriptional regulator
BSR_inoc_143782_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12705..13148
DNA (444bp) protein (148aa)
ABC-type ribose transport system auxiliary component n=1 Tax=Dorea sp. CAG:317 RepID=R6WBJ3_9FIRM
ABC-type ribose transport system auxiliary component {ECO:0000313|EMBL:CDD06770.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ABC-type ribose transport system, auxiliary component
BSR_inoc_143782_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13169..14008
DNA (840bp) protein (280aa)
BtpA family membrane complex biogenesis protein n=6 Tax=Clostridium clostridioforme RepID=N9WS46_9CLOT
BtpA family membrane complex biogenesis protein {ECO:0000313|EMBL:ENZ65638.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
membrane complex biogenesis protein, BtpA family
BSR_inoc_143782_16
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14005..14934
DNA (930bp) protein (310aa)
Ribokinase n=1 Tax=Dorea sp. CAG:317 RepID=R6W6N9_9FIRM
Ribokinase {ECO:0000313|EMBL:CDD06768.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ribokinase
BSR_inoc_143782_17
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14949..16472
DNA (1524bp) protein (508aa)
ABC-type sugar transport system ATPase component n=1 Tax=Dorea sp. CAG:317 RepID=R6XK68_9FIRM
ABC-type sugar transport system ATPase component {ECO:0000313|EMBL:CDD06767.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
sugar ABC transporter ATPase
BSR_inoc_143782_18
Mesotoga infera, Mesotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

16453..17427
DNA (975bp) protein (325aa)
Ribose transport system permease protein rbsC n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JPY3_9THEM
Ribose transport system permease protein rbsC {ECO:0000313|EMBL:CCU84356.1}; TaxID=1236046 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Mesotoga.;" source="Mesotoga infera.;"
ribose/xylose/arabinose/galactoside ABC transporter permease
BSR_inoc_143782_19
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17461..18369
DNA (909bp) protein (303aa)
ABC-type sugar transport system periplasmic component n=1 Tax=Dorea sp. CAG:317 RepID=R6WBI7_9FIRM
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:CDD06765.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
sugar ABC transporter substrate-binding protein
BSR_inoc_143782_20
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(18507..18770)
DNA (264bp) protein (88aa)
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_143782_21
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(18807..19163)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C6U0_BIFBA
hypothetical protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_inoc_143782_22
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(19170..19790)
DNA (621bp) protein (207aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C6U1_BIFBA
putative ABC transport protein, ATP-binding subunit
Tax=BJP_08E140C01_Spirochaeta_53_29
Displaying 22 items

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