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BSR_inoc_2_79026

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_2_79026_1
Candidatus Methylopumilus turicensis, Candidatus Methylopumilus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..163
DNA (162bp) protein (54aa)
hypothetical protein, partial n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036489D7
tufB; protein chain elongation factor EF-Tu, possible GTP-binding factor (duplicate of tufA)
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1581680 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium MMS-10A-171.;"
BSR_inoc_2_79026_2
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


229..537
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J5T2_POLGS
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_3
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


561..1268
DNA (708bp) protein (236aa)
50S ribosomal protein L3 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035CA687
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
BSR_inoc_2_79026_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1268..1888
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003666DEA
rplD; 50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1885..2178
DNA (294bp) protein (98aa)
50S ribosomal protein L23 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036D7E51
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_6
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2195..3028
DNA (834bp) protein (278aa)
50S ribosomal protein L2 n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003669256
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_7
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3041..3319
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Pannonibacter phragmitetus RepID=UPI000370BB36
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
rpsS; 30S ribosomal protein S19
BSR_inoc_2_79026_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3322..3702
DNA (381bp) protein (127aa)
50S ribosomal protein L22 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035D770E
rplV; 50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_9
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3702..4430
DNA (729bp) protein (243aa)
30S ribosomal protein S3 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036C3027
30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4471..4884
DNA (414bp) protein (138aa)
50S ribosomal protein L16 n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003619489
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_11
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4907..5107
DNA (201bp) protein (67aa)
50S ribosomal protein L29 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037BD3BF
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
50S ribosomal protein L29
BSR_inoc_2_79026_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5118..5345
DNA (228bp) protein (76aa)
30S ribosomal protein S17 n=1 Tax=Pannonibacter phragmitetus RepID=UPI000363C3B2
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5415..5783
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IUU7_POLGS
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_14
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5783..6100
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036FB3FB
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_15
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6093..6647
DNA (555bp) protein (185aa)
50S ribosomal protein L5 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035CD1EB
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_16
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6681..6986
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Pannonibacter phragmitetus RepID=UPI000371D7D4
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_17
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6999..7397
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036A7BE9
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_18
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7439..7972
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Pannonibacter phragmitetus RepID=UPI000372E000
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
rplF; 50S ribosomal protein L6
BSR_inoc_2_79026_19
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7985..8347
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036A0672
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_20
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8386..8955
DNA (570bp) protein (190aa)
30S ribosomal protein S5 n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003657ABD
rpsE; 30S ribosomal protein S5
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_21
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8997..9191
DNA (195bp) protein (65aa)
50S ribosomal protein L30 n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003689BC8
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00082687}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_22
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9209..9679
DNA (471bp) protein (157aa)
50S ribosomal protein L15 n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037AB1A1
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
rplO; 50S ribosomal protein L15
BSR_inoc_2_79026_23
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9727..11058
DNA (1332bp) protein (444aa)
preprotein translocase subunit SecY n=1 Tax=Pannonibacter phragmitetus RepID=UPI00037C9A1B
secY; Preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_24
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11055..11660
DNA (606bp) protein (202aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
adenylate kinase n=1 Tax=Pannonibacter phragmitetus RepID=UPI000366DFA7
adenylate kinase
BSR_inoc_2_79026_25
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11826..12194
DNA (369bp) protein (123aa)
30S ribosomal protein S13 n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003774166
30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_26
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12262..12651
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=1 Tax=Pannonibacter phragmitetus RepID=UPI0003690B95
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
30S ribosomal protein S11
BSR_inoc_2_79026_27
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12738..13760
DNA (1023bp) protein (341aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Pannonibacter phragmitetus RepID=UPI00035C8029
rpoA; DNA-directed RNA polymerase subunit alpha
BSR_inoc_2_79026_28
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13840..14265
DNA (426bp) protein (142aa)
50S ribosomal protein L17 n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IUW2_POLGS
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_29
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14442..16619
DNA (2178bp) protein (726aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036D80C3
methyl-accepting chemotaxis protein signaling domain-containing protein
Methyl-accepting chemotaxis protein signaling domain {ECO:0000313|EMBL:ADZ70192.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
BSR_inoc_2_79026_30
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16737..18209
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Pannonibacter phragmitetus RepID=UPI00036B5A0B
Trypsin-like serine protease
Trypsin-like serine protease {ECO:0000313|EMBL:ADZ70193.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
Displaying items 1-30 of 136 in total

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