ggKbase home page

BSR_inoc_2_90954

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_2_90954_1
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..126
DNA (126bp) protein (42aa)
Uncharacterized protein id=4185357 bin=GWF2_Bacteroidetes_40_14 species=Bacteroides sp. D2 genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
glycoside hydrolase
Tax=GWF2_Bacteroidetes_40_14_curated
BSR_inoc_2_90954_2
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(181..1212)
DNA (1032bp) protein (344aa)
Glycerophosphodiester phosphodiesterase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5WSJ7_9DELT
glycerophosphodiester phosphodiesterase
Tax=BJP_IG2102_Acholeplasmatales_34_18
BSR_inoc_2_90954_3
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(1360..3444)
DNA (2085bp) protein (695aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TSA7_ALKMQ
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_90954_4
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3581..4549
DNA (969bp) protein (323aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F5G4_DESDL
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:AGA67901.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
BSR_inoc_2_90954_5
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(4599..4799)
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BJW2_CHLPD
hypothetical protein
Tax=BJP_IG2102_Acholeplasmatales_34_18
BSR_inoc_2_90954_6
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(4875..6257)
DNA (1383bp) protein (461aa)
phrB; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase id=2568374 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_90954_trna_1
unknown

Not on your lists

6385..6455
DNA (71bp)
transferRNA Gly
BSR_inoc_2_90954_7
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

Not on your lists

comp(6527..7720)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B40062
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDD63216.1}; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
hypothetical protein
BSR_inoc_2_90954_8
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

7946..9043
DNA (1098bp) protein (366aa)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase id=4041307 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_90954_9
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

9036..10214
DNA (1179bp) protein (393aa)
Putative pyridoxal phosphate-dependent acyltransferase (EC:2.3.1.-)
Pyridoxal phosphate-dependent acyltransferase id=4041306 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_90954_10
Acholeplasma brassicae, Acholeplasma, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

10321..11070
DNA (750bp) protein (250aa)
Methyltransferase type 11 n=1 Tax=Acholeplasma brassicae RepID=U4KMY0_9MOLU
Methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:CCV65617.1}; TaxID=61635 species="Bacteria; Tenericutes; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Acholeplasma.;" source="Acholeplasma brassicae.;"
BSR_inoc_2_90954_11
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

11116..11991
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2DUF7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERJ12032.1}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
hypothetical protein
BSR_inoc_2_90954_12
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11972..12535
DNA (564bp) protein (188aa)
GCN5-related N-acetyltransferase n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FVZ4_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCY04366.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
GNAT family acetyltransferase
BSR_inoc_2_90954_13
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12528..12824
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M4L1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62792.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
BSR_inoc_2_90954_14
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

Not on your lists

12850..13539
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NBF1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KFZ26351.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
hypothetical protein
BSR_inoc_2_90954_15
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(13547..14413)
DNA (867bp) protein (289aa)
speB; Putative agmatinase (EC:3.5.3.11)
Putative agmatinase n=1 Tax=Acholeplasma brassicae RepID=U4KN06_9MOLU
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_90954_16
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(14397..15923)
DNA (1527bp) protein (509aa)
ldcC; Lysine decarboxylase (EC:4.1.1.18)
Lysine decarboxylase n=1 Tax=Acholeplasma brassicae RepID=U4KMZ2_9MOLU
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_90954_trna_2
unknown

Not on your lists

16047..16129
DNA (83bp)
transferRNA Leu
BSR_inoc_2_90954_17
unknown

Not on your lists

comp(16691..16855)
DNA (165bp) protein (55aa)

This feature has no annotations

BSR_inoc_2_90954_18
Lactobacillus reuteri, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16983..17120
DNA (138bp) protein (46aa)
Transposase (Fragment) id=2013264 bin=GWE2_Bacteroidetes_32_14 species=Clostridium sartagoforme genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
transposase
Integrase core domain protein {ECO:0000313|EMBL:AEI58383.1}; TaxID=491077 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus reuteri (strain ATCC 55730 / SD2112).;"
Displaying 20 items

View Taxonomy