ggKbase home page

BSR_inoc_2_98539

Search features with annotation key words

Displaying items 31-60 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_2_98539_31
unknown

Not on your lists

36813..36995
DNA (183bp) protein (61aa)

This feature has no annotations

BSR_inoc_2_98539_trna_1
unknown

Not on your lists

36903..36986
DNA (84bp)
transferRNA Leu
BSR_inoc_2_98539_32
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37485..38342
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Streptococcus mitis SPAR10 RepID=J0YTS4_STRMT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EUC77929.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
hypothetical protein
BSR_inoc_2_98539_33
Eggerthella sp. YY7918, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38339..39169
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. (strain YY7918) RepID=F7V1H1_EEGSY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK44614.1}; TaxID=502558 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella sp. (strain YY7918).;"
BSR_inoc_2_98539_34
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

39340..40665
DNA (1326bp) protein (442aa)
predicted O-antigen ligase like membrane protein
Integral membrane protein id=3381571 bin=GWF2_Tenericutes_35_184 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_35
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

40670..41557
DNA (888bp) protein (296aa)
Cation diffusion facilitator family transporter id=4090891 bin=GWF2_Bacteroidetes_33_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
cation diffusion facilitator family transporter
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_36
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

comp(41608..42810)
DNA (1203bp) protein (401aa)
WGS project CABT00000000 data, contig 2.2 id=3774541 bin=GWF2_Firmicute_57_13 species=Halorubrum lacusprofundi genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_37
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(42807..43382)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor, ECF subfamily id=3239264 bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
sigR; ECF RNA polymerase sigma factor SigR
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_38
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

43519..44325
DNA (807bp) protein (269aa)
id=3239259 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_39
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

44343..45980
DNA (1638bp) protein (546aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II id=3239258 bin=GWF2_Firmicute_57_13 species=Ruminococcus champanellensis genus=Ruminococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
AMP-dependent synthetase and ligase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_40
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

comp(46055..46627)
DNA (573bp) protein (191aa)
Transcriptional regulator id=3239256 bin=GWF2_Firmicute_57_13 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
transcriptional regulator
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_41
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

46954..48225
DNA (1272bp) protein (424aa)
id=3239254 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_42
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

48322..49047
DNA (726bp) protein (242aa)
Fic family protein id=3239253 bin=GWF2_Firmicute_57_13 species=Clostridium sp. D5 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Fido domain-containing protein
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_43
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

49100..50071
DNA (972bp) protein (324aa)
Lipoyltransferase and lipoate-protein ligase id=3239252 bin=GWF2_Firmicute_57_13 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
lipoyltransferase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_44
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

50108..51199
DNA (1092bp) protein (364aa)
Aminomethyltransferase id=3239251 bin=GWF2_Firmicute_57_13 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
glycine cleavage system protein T
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_45
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

51213..51593
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5S196_9BACE
glycine cleavage system protein H
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_46
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

51602..52939
DNA (1338bp) protein (446aa)
gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Bacteroides sp. CAG:462 RepID=R7CZF5_9BACE
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_47
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

52933..54402
DNA (1470bp) protein (490aa)
glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Uncharacterized protein id=3239247 bin=GWF2_Firmicute_57_13 species=Barnesiella intestinihominis genus=Barnesiella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_48
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

54415..55134
DNA (720bp) protein (240aa)
Colicin V production protein id=3239246 bin=GWF2_Firmicute_57_13 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
colicin V production protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_49
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

55240..55833
DNA (594bp) protein (198aa)
Nitroreductase family protein n=1 Tax=Fusobacterium varium ATCC 27725 RepID=C6JNU8_FUSVA
nitroreductase family protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_50
unknown

Not on your lists

55946..56302
DNA (357bp) protein (119aa)

This feature has no annotations

BSR_inoc_2_98539_51
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(56358..57419)
DNA (1062bp) protein (354aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase id=3239110 bin=GWF2_Firmicute_57_13 species=Catenibacterium mitsuokai genus=Catenibacterium taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_52
Caldicellulosiruptor lactoaceticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

57554..59167
DNA (1614bp) protein (538aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=632516 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor lactoaceticus 6A.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Caldicellulosiruptor lactoaceticus 6A RepID=G2PWV0_9FIRM
phosphoenolpyruvate-protein phosphotransferase
BSR_inoc_2_98539_53
unknown

Not on your lists

59164..59547
DNA (384bp) protein (128aa)

This feature has no annotations

BSR_inoc_2_98539_54
unknown

Not on your lists

59537..59653
DNA (117bp) protein (39aa)

This feature has no annotations

BSR_inoc_2_98539_55
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

59803..61074
DNA (1272bp) protein (424aa)
Lysine 2,3-aminomutase {ECO:0000313|EMBL:EOD00517.1}; EC=5.4.3.2 {ECO:0000313|EMBL:EOD00517.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
Lysine 2,3-aminomutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV60_9CLOT
kamA; L-lysine 2,3-aminomutase
BSR_inoc_2_98539_56
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

61178..61855
DNA (678bp) protein (226aa)
Putative uncharacterized protein id=3835007 bin=GWA2_Tenericute_38_26 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
hypothetical protein, DUF159
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_57
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

Not on your lists

61877..63313
DNA (1437bp) protein (479aa)
nfdA; N-substituted formamide deformylase precursor (EC:3.5.1.91)
N-substituted formamide deformylase {ECO:0000313|EMBL:AIO18620.1}; EC=3.5.1.91 {ECO:0000313|EMBL:AIO18620.1};; TaxID=1541959 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
Amidohydrolase id=3946930 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
BSR_inoc_2_98539_58
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

63313..63513
DNA (201bp) protein (67aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003762118
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT72514.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
BSR_inoc_2_98539_59
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

Not on your lists

63737..65896
DNA (2160bp) protein (720aa)
Putative uncharacterized protein id=4494720 bin=GWF2_Firmicute_57_13 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=GWF2_Tenericutes_57_13_curated
Displaying items 31-60 of 121 in total

View Taxonomy