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BSR_inoc_2_98539

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_inoc_2_98539_1
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1584
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KJ44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN31502.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
Ig-like domain-containing surface protein
BSR_inoc_2_98539_2
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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1588..2973
DNA (1386bp) protein (462aa)
Carbohydrate-binding protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C450_BEUC1
carbohydrate-binding protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
BSR_inoc_2_98539_3
Paenibacillus stellifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3162..4163)
DNA (1002bp) protein (334aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
Tagatose-6-phosphate kinase n=1 Tax=Paenibacillus dendritiformis C454 RepID=H3SGW7_9BACL
ribokinase
BSR_inoc_2_98539_4
Paenibacillus dendritiformis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4105..4713)
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI0002E6137F
Polysialic acid capsule expression protein kpsF {ECO:0000313|EMBL:EHQ61675.1}; TaxID=1131935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus dendritiformis C454.;"
kpsF; polysialic acid capsule expression protein kpsF
BSR_inoc_2_98539_5
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4717..5556)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00037367F8
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AKG36291.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
BSR_inoc_2_98539_6
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5632..6720)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AGD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX38411.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
hypothetical protein
BSR_inoc_2_98539_7
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(6722..8926)
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Geobacillus sp. (strain Y412MC10) RepID=D3ELZ5_GEOS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX66017.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
BSR_inoc_2_98539_8
unknown

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comp(9101..9214)
DNA (114bp) protein (38aa)

This feature has no annotations

BSR_inoc_2_98539_9
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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9304..10521
DNA (1218bp) protein (406aa)
Two component transcriptional regulator, AraC family id=4543300 bin=GWF2_Firmicute_57_13 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
two component transcriptional regulator, arac family
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_10
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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10518..12257
DNA (1740bp) protein (580aa)
Signal transduction histidine kinase, LytS id=4543299 bin=GWF2_Firmicute_57_13 species=unknown genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
signal transduction histidine kinase, lyts
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_11
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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comp(12267..13226)
DNA (960bp) protein (320aa)
id=4543298 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_12
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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13410..14870
DNA (1461bp) protein (487aa)
Extracellular solute-binding protein family 1 id=4543297 bin=GWF2_Firmicute_57_13 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
extracellular solute-binding protein
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_13
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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14887..15795
DNA (909bp) protein (303aa)
ABC-type transporter, integral membrane subunit id=4543242 bin=GWF2_Firmicute_57_13 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
carbohydrate ABC transporter membrane protein 1, CUT1 family
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:AGB17936.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
BSR_inoc_2_98539_14
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15792..16721
DNA (930bp) protein (310aa)
Transporter id=4377188 bin=GWF2_Firmicute_57_13 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
ABC-type transporter integral membrane subunit {ECO:0000313|EMBL:CDE16673.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
binding-protein-dependent transport systems inner membrane component
BSR_inoc_2_98539_15
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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16727..19063
DNA (2337bp) protein (779aa)
Kojibiose phosphorylase id=4377190 bin=GWF2_Firmicute_57_13 species=Treponema brennaborense genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
glycoside hydrolase family protein
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_16
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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19026..21206
DNA (2181bp) protein (727aa)
kojibiose phosphorylase (EC:2.4.1.230)
Kojibiose phosphorylase id=4377191 bin=GWF2_Firmicute_57_13 species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_17
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21206..21853
DNA (648bp) protein (216aa)
Beta-phosphoglucomutase n=1 Tax=Clostridium intestinale URNW RepID=U2Q0T5_9CLOT
Beta-phosphoglucomutase {ECO:0000313|EMBL:ERK29634.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
beta-phosphoglucomutase
BSR_inoc_2_98539_18
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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21899..22198
DNA (300bp) protein (100aa)
Putative uncharacterized protein id=4377193 bin=GWF2_Firmicute_57_13 species=Clostridium celatum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_19
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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22201..22596
DNA (396bp) protein (132aa)
Predicted histidine triad (HIT) protein n=1 Tax=Acholeplasma brassicae RepID=U4KPC6_9MOLU
predicted histidine triad (HIT) protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_20
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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22598..23500
DNA (903bp) protein (301aa)
Pseudouridine synthase id=4377195 bin=GWF2_Firmicute_57_13 species=unknown genus=Turicibacter taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
pseudouridine synthase
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_21
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

23539..24957
DNA (1419bp) protein (473aa)
pykF; Pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase id=3989726 bin=GWA2_Tenericute_38_26 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_22
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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25069..26712
DNA (1644bp) protein (548aa)
Glycosidases (EC:3.2.1.10)
Glycosidase id=2425363 bin=GWF1_Tenericute_35_14 species=Clostridium sp. Maddingley MBC34-26 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
BSR_inoc_2_98539_23
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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comp(26805..27527)
DNA (723bp) protein (241aa)
PAP2 superfamily protein id=4377212 bin=GWF2_Firmicute_57_13 species=unknown genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
PAP2 superfamily.
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_24
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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27685..28551
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:780 RepID=R5PVG9_9CLOT
hypothetical protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_25
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

Not on your lists

28569..28817
DNA (249bp) protein (83aa)
id=3239428 bin=GWF2_Firmicute_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_26
GWF2_Tenericutes_57_13_curated, Tenericutes, Bacteria

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28832..30766
DNA (1935bp) protein (645aa)
Putative uncharacterized protein id=3239302 bin=GWF2_Firmicute_57_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
yheS_1; putative ABC transporter ATP-binding protein YheS
Tax=GWF2_Tenericutes_57_13_curated
BSR_inoc_2_98539_27
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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30827..31345
DNA (519bp) protein (173aa)
NUDIX hydrolase id=3239295 bin=GWF2_Firmicute_57_13 species=Shewanella frigidimarina genus=Shewanella taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Firmicute_57_13 organism_group=Firmicute
NUDIX hydrolase
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_28
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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31368..33077
DNA (1710bp) protein (570aa)
argS; Arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase id=3239288 bin=GWF2_Firmicute_57_13 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_29
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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33120..34970
DNA (1851bp) protein (617aa)
Putative multidrug export ATP-binding/permease protein (EC:3.6.3.-)
ABC transporter related protein id=3239285 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
BSR_inoc_2_98539_30
BJP_IG2103_SUB10_Tenericutes_35_49, Mollicutes, Tenericutes, Bacteria

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34963..36813
DNA (1851bp) protein (617aa)
ABC transporter related protein id=3239280 bin=GWF2_Firmicute_57_13 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWF2_Firmicute_57_13 organism_group=Firmicute
putative ABC transporter ATP-binding protein
Tax=BJP_IG2103_SUB10_Tenericutes_35_49
Displaying items 1-30 of 121 in total

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