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BSR_Ace_UAPBR_effluent_at_13301

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Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_at_13301_trna_1
unknown

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comp(855..926)
DNA (72bp)
transferRNA Gly
BSR_Ace_UAPBR_effluent_at_13301_1
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1159..1668
DNA (510bp) protein (170aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Rhizobium sp. RepID=L0NJQ9_RHISP
Uncharacterized protein {ECO:0000313|EMBL:GAK69986.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
YbaK/prolyl-tRNA synthetase
BSR_Ace_UAPBR_effluent_at_13301_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1717..2691
DNA (975bp) protein (325aa)
Thioredoxin n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZTK1_RHILW
thioredoxin
Thioredoxin {ECO:0000313|EMBL:ACI57037.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
BSR_Ace_UAPBR_effluent_at_13301_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2721..3395
DNA (675bp) protein (225aa)
Peptidase S16 lon domain protein n=2 Tax=Rhizobium leguminosarum bv. trifolii RepID=B5ZTK0_RHILW
peptidase S16
Peptidase S16 lon domain protein {ECO:0000313|EMBL:ACI57036.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
BSR_Ace_UAPBR_effluent_at_13301_4
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3471..3659
DNA (189bp) protein (63aa)
UPF0434 protein Atu3696 n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=Y3696_AGRT5
UPF0434 protein GV67_22615 {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_13301_5
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3748..4965)
DNA (1218bp) protein (406aa)
FAD-dependent monooxygenase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JCQ1_AGRRK
2-octaprenyl-6-methoxyphenyl hydroxylase
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family {ECO:0000313|EMBL:EJK83819.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
BSR_Ace_UAPBR_effluent_at_13301_6
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5323..5661
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2R024_9RHIZ
nitrogen regulatory protein P-II 1
Nitrogen regulatory protein PII {ECO:0000313|EMBL:EKF61207.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
BSR_Ace_UAPBR_effluent_at_13301_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5683..7005
DNA (1323bp) protein (441aa)
Ammonium transporter n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U356_RHIRD
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
amtB; ammonium transporter
BSR_Ace_UAPBR_effluent_at_13301_8
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7249..9879
DNA (2631bp) protein (877aa)
Cell division FtsK/SpoIIIE n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5G5_9RHIZ
Cell division FtsK/SpoIIIE {ECO:0000313|EMBL:EHS52000.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
DNA segregation ATPase, FtsK/SpoIIIE family
BSR_Ace_UAPBR_effluent_at_13301_9
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9944..10618
DNA (675bp) protein (225aa)
Possible lolA type protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUE3_AGRVS
lolA type protein
Outer-membrane lipoprotein carrier protein {ECO:0000256|SAAS:SAAS00088851}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
BSR_Ace_UAPBR_effluent_at_13301_10
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10687..11490
DNA (804bp) protein (268aa)
Exodeoxyribonuclease III Xth n=1 Tax=Rhizobium sp. CF080 RepID=J2T4C5_9RHIZ
Exodeoxyribonuclease III Xth
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:CDN56025.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
BSR_Ace_UAPBR_effluent_at_13301_11
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11512..11958)
DNA (447bp) protein (149aa)
cAMP-dependent kinase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003810335
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EJL53902.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
cyclic nucleotide-binding protein
BSR_Ace_UAPBR_effluent_at_13301_12
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12136..12819)
DNA (684bp) protein (228aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhizobium sp. CF080 RepID=J2JYC7_9RHIZ
Transcriptional regulator {ECO:0000313|EMBL:KGD87458.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Two component response regulator
BSR_Ace_UAPBR_effluent_at_13301_13
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12957..13508
DNA (552bp) protein (184aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F5G9_9RHIZ
ErfK/YbiS/YcfS/YnhG family protein {ECO:0000313|EMBL:EHS52004.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_13301_14
unknown

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13580..13765
DNA (186bp) protein (62aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_13301_15
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13939..15348)
DNA (1410bp) protein (470aa)
bifunctional 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1286640 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain Sm2011 / Rm2011 / 2011).;"
3-isopropylmalate dehydratase large subunit n=8 Tax=Rhizobium meliloti RepID=LEUC_RHIME
BSR_Ace_UAPBR_effluent_at_13301_16
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15709..16227)
DNA (519bp) protein (173aa)
PREDICTED: 50S ribosomal protein L19, chloroplastic-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C10F5C
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
rplS; 50S ribosomal protein L19
BSR_Ace_UAPBR_effluent_at_13301_17
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(16411..17106)
DNA (696bp) protein (232aa)
tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228;; M1G-methyltransferase; tRNA [GM37] methyltransferase; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=TRMD_AGRT5
trmD; tRNA (guanine-N(1)-)-methyltransferase
BSR_Ace_UAPBR_effluent_at_13301_18
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17115..17666)
DNA (552bp) protein (184aa)
Ribosome maturation factor RimM n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRM9_RHITR
rimM; 16S rRNA processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
BSR_Ace_UAPBR_effluent_at_13301_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17885..18238)
DNA (354bp) protein (118aa)
30S ribosomal protein S16 n=1 Tax=Rhizobium mongolense RepID=UPI0003B3CD5D
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
BSR_Ace_UAPBR_effluent_at_13301_20
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18283..18597)
DNA (315bp) protein (105aa)
Chorismate mutase {ECO:0000313|EMBL:EKF61185.1}; EC=5.4.99.5 {ECO:0000313|EMBL:EKF61185.1};; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
Chorismate mutase n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q7G8_9RHIZ
tyrA; chorismate mutase
BSR_Ace_UAPBR_effluent_at_13301_21
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18610..20160)
DNA (1551bp) protein (517aa)
Signal recognition particle protein n=1 Tax=Rhizobium sp. AP16 RepID=J2LAS3_9RHIZ
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
ffh; signal recognition particle GTP-binding protein
BSR_Ace_UAPBR_effluent_at_13301_22
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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20462..21451
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JUC0_AGRVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM38043.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
BSR_Ace_UAPBR_effluent_at_13301_23
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21525..22418
DNA (894bp) protein (298aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
dapF; diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZF8_9RHIZ
BSR_Ace_UAPBR_effluent_at_13301_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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22415..23689
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U7A7_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:EGP58202.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
2-methylthioadenine synthase
BSR_Ace_UAPBR_effluent_at_13301_25
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23715..24932
DNA (1218bp) protein (406aa)
Signal recognition particle receptor FtsY n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XTN0_RHIRD
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
fstY; cell division particle
BSR_Ace_UAPBR_effluent_at_13301_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24936..25589
DNA (654bp) protein (218aa)
Probable intracellular septation protein A n=2 Tax=Agrobacterium RepID=F0L420_AGRSH
ispZ; intracellular septation protein
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
BSR_Ace_UAPBR_effluent_at_13301_27
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25586..26176
DNA (591bp) protein (197aa)
UPF0314 protein AT5A_18466 n=1 Tax=Agrobacterium tumefaciens 5A RepID=H0HDE3_RHIRD
membrane protein
UPF0314 protein BN949_02285 {ECO:0000256|HAMAP-Rule:MF_01514}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
BSR_Ace_UAPBR_effluent_at_13301_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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26262..27461
DNA (1200bp) protein (400aa)
GGDEF family protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7U7A3_RHIRD
GGDEF family protein {ECO:0000313|EMBL:EGP58198.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens F2.;"
Diguanylate cyclase (GGDEF) domain-containing protein
BSR_Ace_UAPBR_effluent_at_13301_29
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27451..27816)
DNA (366bp) protein (122aa)
Putative transmembrane signal peptide protein n=1 Tax=Ensifer adhaerens RepID=I0FX93_ENSAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHK44583.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
Displaying items 1-30 of 82 in total

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