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BSR_Ace_UAPBR_effluent_at_86181

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_at_86181_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(115..684)
DNA (570bp) protein (190aa)
Putative coding sequence n=1 Tax=Rhizobium meliloti RepID=Q52957_RHIML
TRm1b transposase
Putative coding sequence {ECO:0000313|EMBL:CAA39915.1}; TaxID=382 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti).;"
BSR_Ace_UAPBR_effluent_at_86181_2
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(681..1073)
DNA (393bp) protein (131aa)
TRm1a transposase n=2 Tax=Rhizobium meliloti RepID=F7XFD0_SINMM
Orf_Bo004 {ECO:0000313|EMBL:CDM60197.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
TRm1a transposase
BSR_Ace_UAPBR_effluent_at_86181_3
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1260..2318)
DNA (1059bp) protein (353aa)
Putative phage integrase n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M8B2_RHIL3
phage integrase
Putative phage integrase {ECO:0000313|EMBL:CAK10239.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
BSR_Ace_UAPBR_effluent_at_86181_4
unknown

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comp(2315..2611)
DNA (297bp) protein (99aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_86181_5
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2898..3662)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Oligella ureolytica RepID=UPI0003600FC0
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:GAK69865.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
GntR family transcriptional regulator
BSR_Ace_UAPBR_effluent_at_86181_6

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comp(3782..4714)
DNA (933bp) protein (311aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC466 RepID=V4QSW4_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:KKN53101.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BSR_Ace_UAPBR_effluent_at_86181_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5148..6497)
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VWZ6_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJC77936.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_86181_8
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6481..6759)
DNA (279bp) protein (93aa)
Resolvase domain protein n=1 Tax=Sinorhizobium meliloti (strain AK83) RepID=F6EDK1_SINMK
Resolvase domain-containing protein {ECO:0000313|EMBL:CDM60004.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
resolvase domain-containing protein
BSR_Ace_UAPBR_effluent_at_86181_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7056..8408)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYZ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR79285.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cytosine/purines, uracil, thiamine, allantoin transporter permease
BSR_Ace_UAPBR_effluent_at_86181_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8475..10553)
DNA (2079bp) protein (693aa)
Hydantoin utilization protein A n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EW43_9RHIZ
Hydantoin utilization protein A {ECO:0000313|EMBL:EYR79284.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
5-oxoprolinase
BSR_Ace_UAPBR_effluent_at_86181_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10566..12326)
DNA (1761bp) protein (587aa)
Hydantoinase B/oxoprolinase family protein n=4 Tax=Brucella RepID=C0GAC1_9RHIZ
Hydantoin utilization protein B {ECO:0000313|EMBL:EYR79283.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hydantoinase B/oxoprolinase
BSR_Ace_UAPBR_effluent_at_86181_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12569..13534
DNA (966bp) protein (322aa)
Transcriptional activator NphR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMQ7_9RHIZ
Transcriptional activator NphR {ECO:0000313|EMBL:EYR79282.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AraC family transcriptional regulator
BSR_Ace_UAPBR_effluent_at_86181_13
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13636..14529
DNA (894bp) protein (298aa)
Transposase protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9K4A1_AGRVS
transposase protein
Transposase protein {ECO:0000313|EMBL:ACM39551.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
BSR_Ace_UAPBR_effluent_at_86181_14
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14549..14959)
DNA (411bp) protein (137aa)
Transposase n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FWP6_PHAMO
Mobile element protein {ECO:0000313|EMBL:KIL99111.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
transposase
BSR_Ace_UAPBR_effluent_at_86181_15
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(15080..17344)
DNA (2265bp) protein (755aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035C1666
DEAD/DEAH box helicase {ECO:0000313|EMBL:ESY89553.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
DEAD/DEAH box helicase
BSR_Ace_UAPBR_effluent_at_86181_16
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17325..18647)
DNA (1323bp) protein (441aa)
ATP /GTP binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035EEEAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89240.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
BSR_Ace_UAPBR_effluent_at_86181_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(18644..21736)
DNA (3093bp) protein (1031aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037ACAA7
peptidoglycan-binding protein
Peptidoglycan-binding domain 1 protein {ECO:0000313|EMBL:ADH89241.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
BSR_Ace_UAPBR_effluent_at_86181_18
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22082..22405)
DNA (324bp) protein (108aa)
Putative transcriptional regulator n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IIY0_RHIML
Putative transcriptional regulator {ECO:0000313|EMBL:EYR81242.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transcriptional regulator
BSR_Ace_UAPBR_effluent_at_86181_19
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22395..22754)
DNA (360bp) protein (120aa)
RelE family toxin-antitoxin system n=1 Tax=Martelella mediterranea RepID=UPI000372938A
Uncharacterized protein {ECO:0000313|EMBL:EYR81241.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_86181_20
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23093..24244
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5JTS2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT47469.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_86181_21
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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24454..24738
DNA (285bp) protein (95aa)
integrase catalytic subunit (EC:2.7.7.49)
Integrase, catalytic region {ECO:0000313|EMBL:ABA06100.1}; EC=2.7.7.49 {ECO:0000313|EMBL:ABA06100.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Integrase, catalytic region n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNP1_NITWN
BSR_Ace_UAPBR_effluent_at_86181_22
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24722..25393
DNA (672bp) protein (224aa)
integrase catalytic subunit (EC:2.7.7.49)
Integrase, catalytic region {ECO:0000313|EMBL:ABA03748.1}; EC=2.7.7.49 {ECO:0000313|EMBL:ABA03748.1};; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
Integrase, catalytic region n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQG2_NITWN
BSR_Ace_UAPBR_effluent_at_86181_23
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25530..25898
DNA (369bp) protein (123aa)
Transposase, IS4 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RF25_PELHB
transposase, IS4
Transposase, IS4 {ECO:0000313|EMBL:AEQ52958.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
BSR_Ace_UAPBR_effluent_at_86181_24
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26227..27855)
DNA (1629bp) protein (543aa)
methyl-accepting chemotaxis protein n=1 Tax=Rhizobium giardinii RepID=UPI00037E7AD1
Methyl-accepting chemotaxis protein McpB {ECO:0000313|EMBL:CCM76751.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
methyl-accepting chemotaxis sensory transducer
BSR_Ace_UAPBR_effluent_at_86181_25
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(28164..30476)
DNA (2313bp) protein (771aa)
Putative diguanylate cyclase(GGDEF domain) and c-di-GMP phosphodiesterase (EAL domain) n=1 Tax=blood disease bacterium R229 RepID=G2ZVQ6_9RALS
Putative diguanylate cyclase(GGDEF domain) and c-di-GMP phosphodiesterase (EAL domain) {ECO:0000313|EMBL:CCA83184.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood disease bacterium R229.;"
putative diguanylate cyclase(GGDEF domain) and c-di-GMP phosphodiesterase (EAL domain)
BSR_Ace_UAPBR_effluent_at_86181_26
unknown

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comp(31473..31910)
DNA (438bp) protein (146aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_86181_27
unknown

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comp(32262..32489)
DNA (228bp) protein (76aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_86181_28
unknown

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comp(32581..32646)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 28 items

View Taxonomy