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BSR_Ace_UAPBR_inlet_p_172298

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_p_172298_1
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..803
DNA (801bp) protein (267aa)
peptidylprolyl isomerase (EC:5.2.1.8)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036217AA
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
BSR_Ace_UAPBR_inlet_p_172298_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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842..1843
DNA (1002bp) protein (334aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036D7AE5
BSR_Ace_UAPBR_inlet_p_172298_3
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1840..2640
DNA (801bp) protein (267aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00035C7037
dimethyladenosine transferase
BSR_Ace_UAPBR_inlet_p_172298_4
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2990..3427
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00037CD8CA
uspA; Universal stress protein A-like protein 2
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
BSR_Ace_UAPBR_inlet_p_172298_5
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3442..4167)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000360D345
Uncharacterized protein {ECO:0000313|EMBL:EYR67142.1}; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
Crp/Fnr family transcriptional regulator
BSR_Ace_UAPBR_inlet_p_172298_6
Marinobacter nanhaiticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4308..5972
DNA (1665bp) protein (555aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6VUG3_9ALTE
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ENO13765.1}; TaxID=626887 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter nanhaiticus D15-8W.;"
AMP-binding enzyme family protein
BSR_Ace_UAPBR_inlet_p_172298_7
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6007..6882
DNA (876bp) protein (292aa)
MaoC domain protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GTF2_9BURK
MaoC domain protein {ECO:0000313|EMBL:EDM82503.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_172298_8
Limnobacter sp. MED105, Limnobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6879..8186
DNA (1308bp) protein (436aa)
Acetyl-CoA C-acyltransferase n=1 Tax=Limnobacter sp. MED105 RepID=A6GTF1_9BURK
Acetyl-CoA C-acyltransferase {ECO:0000313|EMBL:EDM82502.1}; TaxID=391597 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Limnobacter.;" source="Limnobacter sp. MED105.;"
fadA; 3-ketoacyl-CoA thiolase
BSR_Ace_UAPBR_inlet_p_172298_9
Leptospira weilii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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8243..9025
DNA (783bp) protein (261aa)
Putative lysophospholipase n=1 Tax=Leptospira weilii serovar Ranarum str. ICFT RepID=N1WQY4_9LEPT
Putative lysophospholipase {ECO:0000313|EMBL:EMY78243.1}; TaxID=1218598 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira weilii serovar Ranarum str. ICFT.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_172298_10
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9076..12129)
DNA (3054bp) protein (1018aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036E2264
Uncharacterized protein {ECO:0000313|EMBL:EIT69216.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
sensor diguanylate cyclase/phosphodiesterase, 5TM, PAS, PAS and PAS domain-containing
BSR_Ace_UAPBR_inlet_p_172298_11
unknown

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comp(12143..13708)
DNA (1566bp) protein (522aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_p_172298_12
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13900..14181)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I8T5K6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69215.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_172298_13
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14178..14870)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000370E632
Uncharacterized protein {ECO:0000313|EMBL:EIT69214.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
putative lipoprotein
BSR_Ace_UAPBR_inlet_p_172298_14
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14881..15819)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI00036E683A
Uncharacterized protein {ECO:0000313|EMBL:EIT69213.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
type II secretion system protein
BSR_Ace_UAPBR_inlet_p_172298_15
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15816..16739)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000367A04C
Uncharacterized protein {ECO:0000313|EMBL:EIT69212.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
type II secretion system protein
BSR_Ace_UAPBR_inlet_p_172298_16
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16739..17971)
DNA (1233bp) protein (411aa)
TadA ATPase n=1 Tax=Singularimonas variicoloris RepID=UPI00037FFA45
Type II secretion system protein E {ECO:0000313|EMBL:EIT69211.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
type II secretion system protein E
BSR_Ace_UAPBR_inlet_p_172298_17
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17994..19184)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003755C9D
Uncharacterized protein {ECO:0000313|EMBL:EIT69210.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
response regulator receiver protein
BSR_Ace_UAPBR_inlet_p_172298_18
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19353..20699)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Hydrocarboniphaga effusa AP103 RepID=I7ZBF3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIT69209.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
type II and III secretion system protein
BSR_Ace_UAPBR_inlet_p_172298_19
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20728..21663)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003684768
Uncharacterized protein {ECO:0000313|EMBL:EIT69208.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
Flp pilus assembly protein CpaB
BSR_Ace_UAPBR_inlet_p_172298_20
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(21696..22187)
DNA (492bp) protein (164aa)
TadE-like protein n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H0S5_METFK
tadE-like family protein
Pilus assembly protein TadE {ECO:0000313|EMBL:AKE03861.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
BSR_Ace_UAPBR_inlet_p_172298_21
RBG_16_Desulfobacca_60_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22220..22690)
DNA (471bp) protein (157aa)
peptidase A24 n=1 Tax=Pseudomonas tolaasii RepID=UPI0002E36782
peptidase A24A prepilin type IV
Tax=RBG_16_Desulfobacca_60_12_curated
BSR_Ace_UAPBR_inlet_p_172298_22
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22706..22903)
DNA (198bp) protein (66aa)
Related to pilus assembly protein pilin subunit n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6AN06_DESPS
pilus assembly protein pilin subunit
Tax=RBG_13_Deltaproteobacteria_60_28_curated
BSR_Ace_UAPBR_inlet_p_172298_23
Loktanella vestfoldensis, Loktanella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23184..23789
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Loktanella vestfoldensis SKA53 RepID=A3V2M9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ07610.1}; TaxID=314232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Loktanella.;" source="Loktanella vestfoldensis SKA53.;"
type 11 methyltransferase
BSR_Ace_UAPBR_inlet_p_172298_24
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23815..24987
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Vibrio sp. MED222 RepID=A3XXU2_9VIBR
Membrane protein {ECO:0000313|EMBL:ETR78153.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_p_172298_25
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25120..26376
DNA (1257bp) protein (419aa)
Dolichol-p-glucose synthetase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I878_AZOC5
dolichol-p-glucose synthetase
Dolichol-p-glucose synthetase {ECO:0000313|EMBL:BAF88218.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
BSR_Ace_UAPBR_inlet_p_172298_26
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(26349..27929)
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VAB0_SPHWW
Mlr4739 protein {ECO:0000313|EMBL:GAO54401.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
Displaying 26 items

View Taxonomy