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BSR_Lac_UAPBR_inlet_at_91844

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_at_91844_1
unknown

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comp(1..198)
DNA (198bp) protein (66aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_91844_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(257..736)
DNA (480bp) protein (160aa)
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K5YN17_9PORP
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN15262.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
ECF subfamily RNA polymerase sigma-24 factor
BSR_Lac_UAPBR_inlet_at_91844_3

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comp(733..1713)
DNA (981bp) protein (327aa)
F0F1 ATP synthase subunit gamma n=1 Tax=gut metagenome RepID=J9BRP1_9ZZZZ
F0F1 ATP synthase subunit gamma {ECO:0000313|EMBL:EJW90245.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
F0F1 ATP synthase subunit gamma
BSR_Lac_UAPBR_inlet_at_91844_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1717..3291)
DNA (1575bp) protein (525aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
ATP synthase subunit alpha n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9HT30_BACUN
ATP synthase F1 subunit alpha
BSR_Lac_UAPBR_inlet_at_91844_5
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3257..3856)
DNA (600bp) protein (200aa)
ATP synthase subunit delta id=4805276 bin=GWC2_Bacteroidetes_46_850 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
ATP synthase F0F1 subunit delta
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_Lac_UAPBR_inlet_at_91844_6
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3861..4361)
DNA (501bp) protein (167aa)
ATP synthase subunit b n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QUJ9_9BACT
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
F-type ATP synthase B subunit
BSR_Lac_UAPBR_inlet_at_91844_7
Bacteroides intestinalis CAG:564, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4375..4629)
DNA (255bp) protein (85aa)
ATP synthase F0, C subunit n=2 Tax=Bacteroides RepID=B3CD94_9BACE
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1263049 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides intestinalis CAG:564.;"
ATP synthase subunit C
BSR_Lac_UAPBR_inlet_at_91844_8
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4655..5749)
DNA (1095bp) protein (365aa)
ATP synthase subunit a n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RND4_9BACE
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
ATP synthase subunit A
BSR_Lac_UAPBR_inlet_at_91844_9
unknown

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comp(5791..6192)
DNA (402bp) protein (134aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_at_91844_10
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6208..6465)
DNA (258bp) protein (86aa)
ATP synthase epsilon chain n=1 Tax=Bacteroides sp. CAG:462 RepID=R7CWA6_9BACE
ATP synthase epsilon chain {ECO:0000313|EMBL:CDD82664.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:462.;"
ATP synthase subunit epsilon
BSR_Lac_UAPBR_inlet_at_91844_11
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6469..7965)
DNA (1497bp) protein (499aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
ATP synthase F0F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta n=2 Tax=Bacteroides RepID=R7NLY7_9BACE
BSR_Lac_UAPBR_inlet_at_91844_12
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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8072..9904
DNA (1833bp) protein (611aa)
DNA topoisomerase type IIA subunit B region 2 domain protein id=2097491 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_39_28_curated
BSR_Lac_UAPBR_inlet_at_91844_13
BJP_IG2103_Bacteroidetes_40_10, Bacteroidetes, Bacteria

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9908..12580
DNA (2673bp) protein (891aa)
DNA topoisomerase IV subunit A id=1803587 bin=GWE2_Bacteroidetes_39_28 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_40_10
BSR_Lac_UAPBR_inlet_at_91844_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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12591..13049
DNA (459bp) protein (153aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Shikimate kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NK50_9SPHI
shikimate kinase
BSR_Lac_UAPBR_inlet_at_91844_15
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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comp(13046..14779)
DNA (1734bp) protein (578aa)
Single-stranded-DNA-specific exonuclease RecJ id=1803591 bin=GWE2_Bacteroidetes_39_28 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
BSR_Lac_UAPBR_inlet_at_91844_16
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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14862..16370
DNA (1509bp) protein (503aa)
Lysine--tRNA ligase id=2046245 bin=GWE2_Bacteroidetes_40_15 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
BSR_Lac_UAPBR_inlet_at_91844_17
GWF2_Bacteroidetes_40_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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16429..17166
DNA (738bp) protein (246aa)
tRNA/rRNA methyltransferase (SpoU) id=4175729 bin=GWF2_Bacteroidetes_40_14 species=Prevotella multisaccharivorax genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_14 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_40_14_curated
BSR_Lac_UAPBR_inlet_at_91844_18
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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17171..17908
DNA (738bp) protein (246aa)
Shikimate 5-dehydrogenase (EC:1.1.1.25)
Shikimate 5-dehydrogenase id=4089884 bin=GWF2_Bacteroidetes_39_10 species=Methanoplanus petrolearius genus=Methanoplanus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
Tax=GWE2_Bacteroidetes_39_28_curated
BSR_Lac_UAPBR_inlet_at_91844_19
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17952..18416
DNA (465bp) protein (155aa)
Single-stranded DNA-binding protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5NYK0_9PORP
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
single-stranded DNA-binding protein
BSR_Lac_UAPBR_inlet_at_91844_20

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comp(18417..19826)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XNC6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32030.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_91844_21

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comp(19819..21213)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y479_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD32031.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_at_91844_22
GWE2_Bacteroidetes_39_28_curated, Bacteroidia, Bacteroidetes, Bacteria

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21340..22605
DNA (1266bp) protein (422aa)
Adenylosuccinate synthetase id=1803602 bin=GWE2_Bacteroidetes_39_28 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
hypothetical protein
Tax=GWE2_Bacteroidetes_39_28_curated
BSR_Lac_UAPBR_inlet_at_91844_23
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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22613..24499
DNA (1887bp) protein (629aa)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=uncultured bacterium RepID=K1Y3Y2_9BACT
hypothetical protein
Tax=BJP_IG2069_Bacteroidetes_43_11
BSR_Lac_UAPBR_inlet_at_91844_trna_1
unknown

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24601..24674
DNA (74bp)
transferRNA Thr
BSR_Lac_UAPBR_inlet_at_91844_trna_2
unknown

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24703..24785
DNA (83bp)
transferRNA Tyr
BSR_Lac_UAPBR_inlet_at_91844_trna_3
unknown

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24792..24864
DNA (73bp)
transferRNA Gly
BSR_Lac_UAPBR_inlet_at_91844_trna_4
unknown

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24880..24951
DNA (72bp)
transferRNA Thr
BSR_Lac_UAPBR_inlet_at_91844_24
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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24988..26175
DNA (1188bp) protein (396aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=uncultured bacterium RepID=K1Z2I9_9BACT
Tax=BJP_IG2069_Bacteroidetes_43_11
BSR_Lac_UAPBR_inlet_at_91844_trna_5
unknown

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26241..26311
DNA (71bp)
transferRNA Trp
BSR_Lac_UAPBR_inlet_at_91844_25
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26396..26590
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Bacteroidales bacterium CF RepID=U5Q6T8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY54163.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
Displaying items 1-30 of 151 in total

View Taxonomy