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BSR_Ace_UAPBR_inlet_at_1_92294

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Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_at_1_92294_1
Desulfovibrio alkalitolerans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..141
DNA (141bp) protein (47aa)
Elongation factor Tu n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7UNY8_9DELT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1121439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio alkalitolerans DSM 16529.;"
tuf; elongation factor Tu
BSR_Ace_UAPBR_inlet_at_1_92294_2
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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145..294
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QCZ8_9DELT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
rpmG; 50S ribosomal protein L33
BSR_Ace_UAPBR_inlet_at_1_92294_trna_1
unknown

Not on your lists

324..396
DNA (73bp)
transferRNA Trp
BSR_Ace_UAPBR_inlet_at_1_92294_3
Desulfovibrio sp. U5L, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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433..783
DNA (351bp) protein (117aa)
Protein translocase subunit SecE n=1 Tax=Desulfovibrio sp. U5L RepID=I2Q2T3_9DELT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=596152 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. U5L.;"
secE; preprotein translocase SecE subunit
BSR_Ace_UAPBR_inlet_at_1_92294_4
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

848..1429
DNA (582bp) protein (194aa)
Transcription termination/antitermination protein NusG n=2 Tax=Desulfovibrio RepID=G7QD00_9DELT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
nusG; transcription antitermination protein NusG
BSR_Ace_UAPBR_inlet_at_1_92294_5
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1454..1879
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=2 Tax=Desulfovibrio magneticus RepID=RL11_DESMR
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
BSR_Ace_UAPBR_inlet_at_1_92294_6
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1895..2602
DNA (708bp) protein (236aa)
50S ribosomal protein L1 n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JY45_DESFR
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
rplA; 50S ribosomal protein L1
BSR_Ace_UAPBR_inlet_at_1_92294_7
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2797..3318
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=2 Tax=Desulfovibrio RepID=G7QD03_9DELT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
rplJ; 50S ribosomal protein L10
BSR_Ace_UAPBR_inlet_at_1_92294_8
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3362..3745
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7QD04_9DELT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
rplL; 50S ribosomal protein L7/L12
BSR_Ace_UAPBR_inlet_at_1_92294_9
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3980..8071
DNA (4092bp) protein (1364aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JY42_DESFR
rpoB; DNA-directed RNA polymerase subunit beta
BSR_Ace_UAPBR_inlet_at_1_92294_10
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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8253..12410
DNA (4158bp) protein (1386aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
DNA-directed RNA polymerase subunit beta' n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GEQ8_9DELT
rpoC; DNA-directed RNA polymerase beta' subunit
BSR_Ace_UAPBR_inlet_at_1_92294_11
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12746..13162
DNA (417bp) protein (139aa)
sulfurtransferase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B1F8F
tRNA s(4)U8 sulfurtransferase {ECO:0000313|EMBL:GAF02448.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
rhodanese domain-containing protein
BSR_Ace_UAPBR_inlet_at_1_92294_12
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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14440..16080
DNA (1641bp) protein (547aa)
Glutamate synthase (NADPH) GltB2 subunit {ECO:0000313|EMBL:EMG37735.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EMG37735.1};; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
Glutamate synthase (NADPH) GltB2 subunit n=1 Tax=Desulfovibrio africanus PCS RepID=M5PUQ0_DESAF
ferredoxin-dependent glutamate synthase
BSR_Ace_UAPBR_inlet_at_1_92294_13
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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16191..17537
DNA (1347bp) protein (449aa)
Glutamine synthetase, type I {ECO:0000313|EMBL:EGY25256.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EGY25256.1};; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
glnA; Glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase, type I n=1 Tax=Desulfovibrio sp. A2 RepID=G2H9V2_9DELT
BSR_Ace_UAPBR_inlet_at_1_92294_14
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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17706..18146
DNA (441bp) protein (147aa)
Hypothetical cytosolic protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LY54_SYNAS
cytoplasmic protein
Hypothetical cytosolic protein {ECO:0000313|EMBL:ABC79012.1}; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus.;" source="Syntrophus aciditrophicus (strain SB).;"
BSR_Ace_UAPBR_inlet_at_1_92294_15
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18187..18615)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6G902_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EKO37554.1}; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_at_1_92294_16
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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18757..21960
DNA (3204bp) protein (1068aa)
Trehalose synthase {ECO:0000313|EMBL:KHK00883.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
Trehalose synthase id=3727119 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
alpha amylase, catalytic subdomain
BSR_Ace_UAPBR_inlet_at_1_92294_17
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21957..22772
DNA (816bp) protein (272aa)
Trehalose 6-phosphate phosphatase {ECO:0000256|RuleBase:RU361117}; EC=3.1.3.12 {ECO:0000256|RuleBase:RU361117};; Flags: Precursor;; TaxID=1206767 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus str. Maddingley MBC34.;"
Trehalose-phosphatase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GP26_9DELT
trehalose-phosphatase
BSR_Ace_UAPBR_inlet_at_1_92294_18
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22774..24309
DNA (1536bp) protein (512aa)
Trehalose 6-phosphate synthase {ECO:0000313|EMBL:EMG38763.1}; EC=2.4.1.15 {ECO:0000313|EMBL:EMG38763.1};; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
Trehalose 6-phosphate synthase n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q3N6_DESAF
alpha,alpha-trehalose-phosphate synthase
BSR_Ace_UAPBR_inlet_at_1_92294_19
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24386..24790)
DNA (405bp) protein (135aa)
Response regulator receiver protein n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RFI5_9DELT
Response regulator receiver protein
Response regulator receiver {ECO:0000313|EMBL:ADU62696.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
BSR_Ace_UAPBR_inlet_at_1_92294_20
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24834..28127)
DNA (3294bp) protein (1098aa)
PAS domain S-box/PAS domain S-box n=1 Tax=Rheinheimera sp. A13L RepID=F7NWN3_9GAMM
PAS domain S-box/PAS domain S-box {ECO:0000313|EMBL:EGM77662.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;"
two component response regulator sensor histidine kinase/response regulator subunits
BSR_Ace_UAPBR_inlet_at_1_92294_21
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28149..29327)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YCM3_9DELT
Uncharacterized protein {ECO:0000313|EMBL:KJS03193.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
ABC transporter substrate-binding protein
BSR_Ace_UAPBR_inlet_at_1_92294_22
Desulfovibrio sp. TomC, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29731..30312
DNA (582bp) protein (194aa)
Transcriptional regulator n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6HDR0_9DELT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:KHK01169.1}; TaxID=1562888 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. TomC.;"
TetR family transcriptional regulator
BSR_Ace_UAPBR_inlet_at_1_92294_23
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30630..31859
DNA (1230bp) protein (410aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q630_9DELT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHJ47046.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
secretion protein HlyD family protein
BSR_Ace_UAPBR_inlet_at_1_92294_24
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31859..34984
DNA (3126bp) protein (1042aa)
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q631_9DELT
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:EHJ47047.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
acrB; AcrB protein
BSR_Ace_UAPBR_inlet_at_1_92294_25
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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35476..38451
DNA (2976bp) protein (992aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) RepID=B8DPY6_DESVM
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ACL08850.1}; TaxID=883 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637).;"
BSR_Ace_UAPBR_inlet_at_1_92294_26
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38503..39648)
DNA (1146bp) protein (382aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3C8EB
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIX12425.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus sp. SPR.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family
BSR_Ace_UAPBR_inlet_at_1_92294_27
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39677..40549)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Desulfovibrio sp. FW1012B RepID=G7Q4G8_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EHJ47191.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
BSR_Ace_UAPBR_inlet_at_1_92294_28
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40565..41140)
DNA (576bp) protein (192aa)
LemA family protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XPN1_DESMR
LemA family protein
LemA family protein {ECO:0000313|EMBL:BAH75211.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
BSR_Ace_UAPBR_inlet_at_1_92294_29
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41220..41873)
DNA (654bp) protein (218aa)
PHP domain protein n=1 Tax=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) RepID=C4XPN2_DESMR
hypothetical protein
PHP domain protein {ECO:0000313|EMBL:BAH75212.1}; TaxID=573370 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1).;"
Displaying items 1-30 of 102 in total

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