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BSR_Lac_LFCR_na_p_60243

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_p_60243_1
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..3114)
DNA (3114bp) protein (1038aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
DNA-directed RNA polymerase subunit beta n=2 Tax=Stenotrophomonas RepID=B8L0E1_9GAMM
DNA-directed RNA polymerase subunit beta
BSR_Lac_LFCR_na_p_60243_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3441..3809)
DNA (369bp) protein (123aa)
50S ribosomal protein L7 n=1 Tax=Xanthomonadaceae RepID=UPI00029A9F83
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=40324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (Pseudomonas maltophilia) (Xanthomonas; maltophilia).;"
BSR_Lac_LFCR_na_p_60243_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3873..4409)
DNA (537bp) protein (179aa)
50S ribosomal protein L10 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KMM8_STEMA
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
rplJ; 50S ribosomal protein L10
BSR_Lac_LFCR_na_p_60243_4
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4796..5494)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=6 Tax=Stenotrophomonas RepID=RL1_STRMK
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
BSR_Lac_LFCR_na_p_60243_5
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5499..5927)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=11 Tax=Stenotrophomonas RepID=RL11_STRM5
rplK; 50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
BSR_Lac_LFCR_na_p_60243_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6226..6786)
DNA (561bp) protein (187aa)
Transcription termination/antitermination protein NusG n=9 Tax=Stenotrophomonas RepID=B2FQ33_STRMK
nusG; transcription antitermination protein NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
BSR_Lac_LFCR_na_p_60243_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6797..7210)
DNA (414bp) protein (138aa)
Protein translocase subunit SecE n=2 Tax=Stenotrophomonas RepID=B8L0E7_9GAMM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
preprotein translocase subunit SecE
BSR_Lac_LFCR_na_p_60243_trna_5
unknown

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comp(7263..7335)
DNA (73bp)
transferRNA Trp
BSR_Lac_LFCR_na_p_60243_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7438..8628)
DNA (1191bp) protein (397aa)
Elongation factor Tu n=6 Tax=Stenotrophomonas RepID=B2FQ31_STRMK
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
BSR_Lac_LFCR_na_p_60243_trna_4
unknown

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comp(8673..8745)
DNA (73bp)
transferRNA Thr
BSR_Lac_LFCR_na_p_60243_trna_3
unknown

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comp(8798..8868)
DNA (71bp)
transferRNA Gly
BSR_Lac_LFCR_na_p_60243_trna_2
unknown

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comp(8896..8978)
DNA (83bp)
transferRNA Tyr
BSR_Lac_LFCR_na_p_60243_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9116..10132)
DNA (1017bp) protein (339aa)
beta-aspartyl-peptidase (EC:3.4.19.5)
Beta-aspartyl-peptidase {ECO:0000313|EMBL:AEM50081.1}; EC=3.4.19.5 {ECO:0000313|EMBL:AEM50081.1};; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Beta-aspartyl-peptidase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZ28_STEMA
BSR_Lac_LFCR_na_p_60243_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10255..11274)
DNA (1020bp) protein (340aa)
Peptidase S51 dipeptidase E n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZ27_STEMA
peptidase S51 dipeptidase E
Peptidase S51 dipeptidase E {ECO:0000313|EMBL:AEM50080.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_60243_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11445..14183
DNA (2739bp) protein (913aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia Ab55555 RepID=J7VHZ1_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP77844.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
TonB dependent receptor protein
BSR_Lac_LFCR_na_p_60243_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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14347..17118
DNA (2772bp) protein (924aa)
Integral membrane sensor hybrid histidine kinase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JZ25_STEMA
integral membrane sensor hybrid histidine kinase
Integral membrane sensor hybrid histidine kinase {ECO:0000313|EMBL:AEM50078.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_60243_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17115..18335
DNA (1221bp) protein (407aa)
Response regulator receiver modulated diguanylate phosphodiesterase n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SKU4_STRM5
response regulator receiver modulated diguanylate phosphodiesterase
Response regulator receiver modulated diguanylate phosphodiesterase {ECO:0000313|EMBL:ACF50442.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
BSR_Lac_LFCR_na_p_60243_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18461..21694
DNA (3234bp) protein (1078aa)
Signal transduction histidine kinase n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KJV6_STEMA
Histidine kinase {ECO:0000313|EMBL:KDE91465.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
Signal transduction histidine kinase
BSR_Lac_LFCR_na_p_60243_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21691..22332
DNA (642bp) protein (214aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7UPK1_STEMA
two-component response regulator transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EJP77840.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
BSR_Lac_LFCR_na_p_60243_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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22596..25835
DNA (3240bp) protein (1080aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYM4_STEMA
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:AEM50074.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
outer membrane autotransporter barrel domain-containing protein
BSR_Lac_LFCR_na_p_60243_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26310..27401)
DNA (1092bp) protein (364aa)
Ribosome-binding ATPase YchF n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYM3_STEMA
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_60243_18
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27553..28131)
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L0F3_9GAMM
BSR_Lac_LFCR_na_p_60243_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28180..28797)
DNA (618bp) protein (206aa)
50S ribosomal protein L25 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYM1_STEMA
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00147491}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023359}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_60243_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28908..29870)
DNA (963bp) protein (321aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
Ribose-phosphate pyrophosphokinase n=11 Tax=Stenotrophomonas RepID=G0JYM0_STEMA
BSR_Lac_LFCR_na_p_60243_trna_1
unknown

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comp(30010..30083)
DNA (74bp)
transferRNA Gln
BSR_Lac_LFCR_na_p_60243_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30095..30964)
DNA (870bp) protein (290aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.-)
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B569B
BSR_Lac_LFCR_na_p_60243_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30961..31620)
DNA (660bp) protein (220aa)
Outer-membrane lipoprotein LolB n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYL8_STEMA
outer-membrane lipoprotein lolB
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1163399 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia D457.;"
BSR_Lac_LFCR_na_p_60243_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31617..33311)
DNA (1695bp) protein (565aa)
Tetratricopeptide TPR_2 repeat-containing protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JYL7_STEMA
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:AEM50067.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
hypothetical protein
BSR_Lac_LFCR_na_p_60243_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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33366..34649
DNA (1284bp) protein (428aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
glutamyl-tRNA reductase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036DBC49
BSR_Lac_LFCR_na_p_60243_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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34627..35400
DNA (774bp) protein (258aa)
peptide chain release factor 1 n=1 Tax=Xanthomonadaceae RepID=UPI00029B232D
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1235458 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia AU12-09.;"
Displaying 30 items

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