ggKbase home page

BSR_Lac_LFCR_na_p_122293

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_p_122293_1
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1163)
DNA (1161bp) protein (387aa)
membrane protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029A2C96
Beta-propeller domains of methanol dehydrogenase type {ECO:0000313|EMBL:EZP44537.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;"
hypothetical protein
BSR_Lac_LFCR_na_p_122293_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1160..2998)
DNA (1839bp) protein (613aa)
peptidase n=1 Tax=Pseudomonas geniculata RepID=UPI000299FD14
Peptidase M3A and M3B thimet/oligopeptidase F {ECO:0000313|EMBL:ACF53502.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
peptidase M3A and M3B thimet/oligopeptidase F
BSR_Lac_LFCR_na_p_122293_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3072..3584)
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=J7US78_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EJP78790.1}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
hypothetical protein
BSR_Lac_LFCR_na_p_122293_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3667..4293
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Pseudomonas geniculata RepID=UPI00029AEE37
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAQ47790.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
BSR_Lac_LFCR_na_p_122293_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4348..4512)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVW6_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM53158.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_122293_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4786..6210)
DNA (1425bp) protein (475aa)
Short chain fatty acid transporter n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVW7_STEMA
short chain fatty acid transporter
Short chain fatty acid transporter {ECO:0000313|EMBL:AEM53159.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_122293_7
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6397..7290)
DNA (894bp) protein (298aa)
4-hydroxybenzoate octaprenyltransferase {ECO:0000256|SAAS:SAAS00210629}; EC=2.5.1.- {ECO:0000256|SAAS:SAAS00272707};; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
4-hydroxybenzoate octaprenyltransferase n=4 Tax=Stenotrophomonas maltophilia RepID=B2FLJ7_STRMK
ubiA; 4-hydroxybenzoate octaprenyltransferase
BSR_Lac_LFCR_na_p_122293_trna_1
unknown

Not on your lists

7440..7513
DNA (74bp)
transferRNA Arg
BSR_Lac_LFCR_na_p_122293_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7589..8719
DNA (1131bp) protein (377aa)
Transcriptional regulator, AraC family n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVW9_STEMA
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEM53161.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_122293_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8802..10679
DNA (1878bp) protein (626aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVX0_STEMA
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:AEM53162.1}; Flags: Precursor;; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
PDZ/DHR/GLGF domain-containing protein
BSR_Lac_LFCR_na_p_122293_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10723..11130)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SM65_STRM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF53510.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
BSR_Lac_LFCR_na_p_122293_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11287..12651)
DNA (1365bp) protein (455aa)
Glycosyl hydrolase family 109 n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KCF2_STEMA
NAD binding oxidoreductase
Glycosyl hydrolase family 109 {ECO:0000313|EMBL:EQM80698.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
BSR_Lac_LFCR_na_p_122293_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12708..15683)
DNA (2976bp) protein (992aa)
HgbB protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D494_STEMA
HgbB protein {ECO:0000313|EMBL:CCP18811.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
TonB-dependent receptor
BSR_Lac_LFCR_na_p_122293_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15817..19146)
DNA (3330bp) protein (1110aa)
Glycoside hydrolase family 31 n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVY1_STEMA
Glycoside hydrolase family 31 {ECO:0000313|EMBL:AEM53173.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
glycoside hydrolase family protein
BSR_Lac_LFCR_na_p_122293_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19469..20653
DNA (1185bp) protein (395aa)
Tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:CCP13674.1}; EC=5.-.-.- {ECO:0000313|EMBL:CCP13674.1};; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
Tagatose-6-phosphate ketose/aldose isomerase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CRM2_STEMA
agaS; sugar isomerase
BSR_Lac_LFCR_na_p_122293_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20646..21584
DNA (939bp) protein (313aa)
ROK family protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SM70_STRM5
ROK family protein
ROK family protein {ECO:0000313|EMBL:ACF53515.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
BSR_Lac_LFCR_na_p_122293_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21601..22935
DNA (1335bp) protein (445aa)
Tagatose 6-phosphate kinase {ECO:0000313|EMBL:CCP18815.1}; EC=2.7.1.144 {ECO:0000313|EMBL:CCP18815.1};; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
D-tagatose-bisphosphate aldolase non-catalytic subunit (EC:4.1.2.40)
Tagatose 6-phosphate kinase n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D5H0_STEMA
BSR_Lac_LFCR_na_p_122293_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22969..23745
DNA (777bp) protein (259aa)
Transcriptional regulator, DeoR family n=2 Tax=Stenotrophomonas maltophilia RepID=G0JVY5_STEMA
DeoR family transcriptional regulator
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:AEM53177.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_122293_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23742..24479
DNA (738bp) protein (246aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JVY6_STEMA
Displaying 19 items

View Taxonomy