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BSR_Lac_LFCR_na_p_142810

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_LFCR_na_p_142810_1
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..748
DNA (747bp) protein (249aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pseudomonas geniculata RepID=UPI00029B24D8
BSR_Lac_LFCR_na_p_142810_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(862..1065)
DNA (204bp) protein (68aa)
Uncharacterized protein n=6 Tax=Stenotrophomonas maltophilia RepID=B4SQE9_STRM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDE92059.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
BSR_Lac_LFCR_na_p_142810_3
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1249..1812)
DNA (564bp) protein (188aa)
Uncharacterized protein n=2 Tax=Xanthomonadaceae RepID=T5L9N4_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM87275.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
BSR_Lac_LFCR_na_p_142810_4
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1944..2150)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029ABD61
Uncharacterized protein {ECO:0000313|EMBL:KDE92061.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia M30.;"
hypothetical protein
BSR_Lac_LFCR_na_p_142810_5
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2328..2495
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=T5KUF9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM87308.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
hypothetical protein
BSR_Lac_LFCR_na_p_142810_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2555..2839
DNA (285bp) protein (95aa)
Uncharacterized protein n=4 Tax=Stenotrophomonas maltophilia RepID=B2FN61_STRMK
hypothetical protein
Peptidase {ECO:0000313|EMBL:EQM87277.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
BSR_Lac_LFCR_na_p_142810_7
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2852..3085
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Stenotrophomonas sp. SKA14 RepID=B8L4L9_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EED37540.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical protein
BSR_Lac_LFCR_na_p_142810_8
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3082..3744
DNA (663bp) protein (221aa)
TetR family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002D48FA6
TetR family transcriptional regulator
Putative transcriptional regulator-TetR family {ECO:0000313|EMBL:CAQ46790.1}; TaxID=522373 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain K279a).;"
BSR_Lac_LFCR_na_p_142810_9
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3758..4090
DNA (333bp) protein (111aa)
Small multidrug resistance protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQF6_STRM5
small multidrug resistance protein
Small multidrug resistance protein {ECO:0000313|EMBL:ACF52487.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
BSR_Lac_LFCR_na_p_142810_10
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4113..4286)
DNA (174bp) protein (58aa)
UPF0391 membrane protein Smal_2788 n=4 Tax=Stenotrophomonas RepID=B4SQF7_STRM5
hypothetical protein
UPF0391 membrane protein SMSKK35_2527 {ECO:0000256|HAMAP-Rule:MF_01361}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
BSR_Lac_LFCR_na_p_142810_11
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4381..5022)
DNA (642bp) protein (214aa)
Leucine efflux protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D0X6_STEMA
Leucine efflux protein {ECO:0000313|EMBL:CCP17572.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
lysine exporter protein LysE/YggA
BSR_Lac_LFCR_na_p_142810_12
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5120..5728)
DNA (609bp) protein (203aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Stenotrophomonas maltophilia RepID=B4SQF9_STRM5
BSR_Lac_LFCR_na_p_142810_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..6113)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D7X7_STEMA
Uncharacterized protein {ECO:0000313|EMBL:CCP17574.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
hypothetical protein
BSR_Lac_LFCR_na_p_142810_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6113..6469)
DNA (357bp) protein (119aa)
Regulatory protein ArsR n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JWP0_STEMA
regulatory protein ArsR
Regulatory protein ArsR {ECO:0000313|EMBL:AEM52136.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_142810_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6511..7203
DNA (693bp) protein (231aa)
Aspartate racemase n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3FIF7_STEMA
Aspartate racemase {ECO:0000313|EMBL:EQM87310.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
aspartate racemase
BSR_Lac_LFCR_na_p_142810_16
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7228..7623)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Stenotrophomonas maltophilia RepID=B4SQG3_STRM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF52494.1}; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
BSR_Lac_LFCR_na_p_142810_17
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7866..8375
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SQG4_STRM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF52495.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
BSR_Lac_LFCR_na_p_142810_18
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8461..8898
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Stenotrophomonas maltophilia SKK35 RepID=M5CPC9_STEMA
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCP12522.1}; TaxID=1118156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia SKK35.;"
N-acetyltransferase GCN5
BSR_Lac_LFCR_na_p_142810_19
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8877..9218)
DNA (342bp) protein (114aa)
Protein-tyrosine phosphatase, low molecular weight n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JWP4_STEMA
protein-tyrosine phosphatase, low molecular weight
Protein-tyrosine phosphatase, low molecular weight {ECO:0000313|EMBL:AEM52140.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_142810_20
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9215..9415)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JWP5_STEMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM52141.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
BSR_Lac_LFCR_na_p_142810_trna_1
unknown

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comp(9536..9609)
DNA (74bp)
transferRNA Pro
BSR_Lac_LFCR_na_p_142810_21
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9678..10034)
DNA (357bp) protein (119aa)
Transcriptional regulator, MerR family n=11 Tax=Stenotrophomonas RepID=B4SQG7_STRM5
MerR family transcriptional regulator
HTH-type transcriptional regulator glnR {ECO:0000313|EMBL:CCP17581.1}; TaxID=1118157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia RA8.;"
BSR_Lac_LFCR_na_p_142810_22
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10015..10314)
DNA (300bp) protein (100aa)
Integration host factor subunit alpha n=11 Tax=Stenotrophomonas RepID=IHFA_STRM5
ihfA; integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000255|HAMAP-Rule:MF_00380}; Short=IHF-alpha {ECO:0000255|HAMAP-Rule:MF_00380};; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia (strain R551-3).;"
BSR_Lac_LFCR_na_p_142810_23
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10342..12765)
DNA (2424bp) protein (808aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5L9P8_STEMA
phenylalanyl-tRNA synthetase beta chain
BSR_Lac_LFCR_na_p_142810_24
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12822..13817)
DNA (996bp) protein (332aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016844};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1183154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia Ab55555.;"
Phenylalanine--tRNA ligase alpha subunit n=3 Tax=Stenotrophomonas RepID=I0KQY2_STEMA
Displaying 25 items

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