ggKbase home page

BSR_Lac_UAPBR_middle_p_20250

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_middle_p_20250_1
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3..113
DNA (111bp) protein (37aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RT28_SPHGB
transposase IS204/IS1001/IS1096/IS1165 family protein
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:ADY14472.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Lac_UAPBR_middle_p_20250_2
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

258..2069
DNA (1812bp) protein (604aa)
Transposase IS4 family protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GIP4_SPICD
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEC02178.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_20250_3
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2240..3331
DNA (1092bp) protein (364aa)
Transcriptional regulator, LacI family n=1 Tax=Paenibacillus mucilaginosus (strain KNP414) RepID=F8FHN6_PAEMK
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEI42743.1}; TaxID=1036673 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus (strain KNP414).;"
BSR_Lac_UAPBR_middle_p_20250_4
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3492..4187
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GKZ1_SPICD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC01904.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_20250_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4298..6124)
DNA (1827bp) protein (609aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56922.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
BSR_Lac_UAPBR_middle_p_20250_6
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6444..7742)
DNA (1299bp) protein (433aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKT6_TREBD
TRAP dicarboxylate transporter subunit DctM
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:AEE15547.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
BSR_Lac_UAPBR_middle_p_20250_7
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7752..8282)
DNA (531bp) protein (177aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKT7_TREBD
tripartite AtP-independent periplasmic transporter subunit DctQ
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:AEE15548.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
BSR_Lac_UAPBR_middle_p_20250_8
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8365..9363)
DNA (999bp) protein (333aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKT8_TREBD
TRAP dicarboxylate transporter subunit DctP
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:AEE15549.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
BSR_Lac_UAPBR_middle_p_20250_9
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9982..11004
DNA (1023bp) protein (341aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHS6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98917.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
BSR_Lac_UAPBR_middle_p_20250_10
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11021..12061
DNA (1041bp) protein (347aa)
L-iditol 2-dehydrogenase (EC:1.1.1.14)
L-iditol 2-dehydrogenase {ECO:0000313|EMBL:AEE15551.1}; EC=1.1.1.14 {ECO:0000313|EMBL:AEE15551.1};; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L-iditol 2-dehydrogenase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LKU0_TREBD
BSR_Lac_UAPBR_middle_p_20250_11
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12168..12929
DNA (762bp) protein (254aa)
Transcriptional regulator, GntR family n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RTZ4_SPHGB
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADY14072.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Lac_UAPBR_middle_p_20250_12
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12932..13744)
DNA (813bp) protein (271aa)
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QXP2_SPHPG
inositol monophosphatase/fructose-1,6-bisphosphatase family protein
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:AEV30686.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_20250_13
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(13741..14433)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3KKQ9_TRESO
Metal-dependent hydrolases of the beta-lactamase superfamily III
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_20250_14
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14433..15251)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JJ54_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF25075.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
sugar ABC transporter permease
BSR_Lac_UAPBR_middle_p_20250_15
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(15265..16173)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JL56_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF25076.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
sugar ABC transporter permease
BSR_Lac_UAPBR_middle_p_20250_16
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16241..17569)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JZE8_TRESO
Uncharacterized protein {ECO:0000313|EMBL:EPF25077.1}; TaxID=1125701 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
family 1 extracellular solute-binding protein
BSR_Lac_UAPBR_middle_p_20250_17
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(17742..19925)
DNA (2184bp) protein (728aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WY71_9CLOT
Transcriptional regulators
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_20250_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20160..20915
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42439.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
GntR family transcriptional regulator
BSR_Lac_UAPBR_middle_p_20250_19
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

21077..22249
DNA (1173bp) protein (391aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXI3_SPHGB
BSR_Lac_UAPBR_middle_p_20250_20
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

22259..23017
DNA (759bp) protein (253aa)
Glucosamine/galactosamine-6-phosphate isomerase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXI4_SPHGB
glucosamine/galactosamine-6-phosphate isomerase
Glucosamine/galactosamine-6-phosphate isomerase {ECO:0000313|EMBL:ADY12034.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Lac_UAPBR_middle_p_20250_21
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23163..24536)
DNA (1374bp) protein (458aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Beta-galactosidase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QYI0_SPHPG
beta-galactosidase
BSR_Lac_UAPBR_middle_p_20250_22
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24552..25598)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00036947C1
Oxidoreductase zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:CDC03621.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
alcohol dehydrogenase zinc-binding domain-containing protein
BSR_Lac_UAPBR_middle_p_20250_23
Thermoanaerobacter pseudethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25641..26690)
DNA (1050bp) protein (350aa)
Oxidoreductase domain protein n=2 Tax=Thermoanaerobacter RepID=B0K7A7_THEP3
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ABY94254.1}; TaxID=340099 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E); (Clostridium thermohydrosulfuricum).;"
BSR_Lac_UAPBR_middle_p_20250_24
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26697..27461)
DNA (765bp) protein (255aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
Hydroxypyruvate isomerase n=1 Tax=Rhodopirellula sp. SWK7 RepID=M5TF69_9PLAN
xylose isomerase domain-containing protein
BSR_Lac_UAPBR_middle_p_20250_25
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(27485..28342)
DNA (858bp) protein (286aa)
ABC transporter, permease protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YDA1_TREAZ
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:AEF82858.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
BSR_Lac_UAPBR_middle_p_20250_26
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28362..28532)
DNA (171bp) protein (57aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003776E35
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:AEF80964.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
BSR_Lac_UAPBR_middle_p_20250_27
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28516..29082)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003776E35
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:AEF80964.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
BSR_Lac_UAPBR_middle_p_20250_28
unknown

Not on your lists

comp(29122..29271)
DNA (150bp) protein (50aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_20250_29
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(29337..30623)
DNA (1287bp) protein (429aa)
Putative bacterial extracellular solute-binding protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YDA2_TREAZ
putative extracellular solute-binding protein
Putative bacterial extracellular solute-binding protein {ECO:0000313|EMBL:AEF80346.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
BSR_Lac_UAPBR_middle_p_20250_30
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(30686..31699)
DNA (1014bp) protein (338aa)
Transcriptional regulator n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YD99_TREAZ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEF80160.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
Displaying items 1-30 of 37 in total

View Taxonomy