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BSR_Lac_UAPBR_middle_p_131596

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_middle_p_131596_1
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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247..1011
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTL6_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV27981.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_131596_2
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1008..2156
DNA (1149bp) protein (383aa)
Glycosyl transferase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTL5_SPHPG
glycosyl transferase family protein
Glycosyl transferase {ECO:0000313|EMBL:AEV27980.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_131596_3
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2284..2460
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHS9_SPICD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC01617.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_131596_4
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2591..3169)
DNA (579bp) protein (193aa)
TetR family transcriptional regulator n=1 Tax=Clostridium intestinale URNW RepID=U2PRV3_9CLOT
TetR family transcriptional regulator {ECO:0000313|EMBL:ERK29175.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
TetR family transcriptional regulator
BSR_Lac_UAPBR_middle_p_131596_5
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(3381..6035)
DNA (2655bp) protein (885aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Valine--tRNA ligase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTL2_SPHPG
valyl-tRNA synthetase
BSR_Lac_UAPBR_middle_p_131596_6
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6143..7600)
DNA (1458bp) protein (486aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
glycogen/starch synthases, ADP-glucose type (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Clostridium sp. L2-50 RepID=A7VD86_9CLOT
BSR_Lac_UAPBR_middle_p_131596_7
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7809..8408)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHS2_SPICD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC01610.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_131596_8
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(8398..8928)
DNA (531bp) protein (177aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=4689191 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
ECF subfamily RNA polymerase sigma-24 subunit
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_131596_9
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8956..10371)
DNA (1416bp) protein (472aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Cysteine--tRNA ligase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHS0_SPICD
cysteinyl-tRNA synthetase
BSR_Lac_UAPBR_middle_p_131596_10
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

10556..11491
DNA (936bp) protein (312aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHR9_SPICD
UDP-N-acetylenolpyruvoylglucosamine reductase
BSR_Lac_UAPBR_middle_p_131596_11
unknown

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comp(11486..12898)
DNA (1413bp) protein (471aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_131596_12
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13164..14498
DNA (1335bp) protein (445aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Acetate kinase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTK6_SPHPG
acetate kinase
BSR_Lac_UAPBR_middle_p_131596_13
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14555..15781)
DNA (1227bp) protein (409aa)
Hypothetical transmembrane transport protein n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D4A6_PELTS
putative transmembrane transport protein
Putative transmembrane transport protein {ECO:0000313|EMBL:AHM55858.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 3953.;"
BSR_Lac_UAPBR_middle_p_131596_14
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15783..16340)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZCF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ95528.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
BSR_Lac_UAPBR_middle_p_131596_15
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(16456..16806)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RPQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44719.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
BSR_Lac_UAPBR_middle_p_131596_16
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(16875..18392)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QR74_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV31009.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_131596_17
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(18486..19037)
DNA (552bp) protein (184aa)
DJ-1 family protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWE4_SPHGB
DJ-1 family protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_131596_18
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(19123..20199)
DNA (1077bp) protein (359aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QR72_SPHPG
phospho-2-dehydro-3-deoxyheptonate aldolase
BSR_Lac_UAPBR_middle_p_131596_19
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20313..22184)
DNA (1872bp) protein (624aa)
long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:ADY13577.1}; EC=6.2.1.3 {ECO:0000313|EMBL:ADY13577.1};; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWE6_SPHGB
BSR_Lac_UAPBR_middle_p_131596_20
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22207..23046)
DNA (840bp) protein (280aa)
Beta-lactamase domain protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHZ6_SPICD
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEC02109.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_131596_21
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(23043..23420)
DNA (378bp) protein (126aa)
Arsenate reductase like protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWE8_SPHGB
arsenate reductase
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_131596_22
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(23574..25490)
DNA (1917bp) protein (639aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QR68_SPHPG
AMP-forming long-chain acyl-CoA synthetase
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:AEV31003.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_131596_23
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25766..27454)
DNA (1689bp) protein (563aa)
Carbon starvation protein, predicted membrane protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QR67_SPHPG
carbon starvation membrane protein
Carbon starvation protein, predicted membrane protein {ECO:0000313|EMBL:AEV31002.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_131596_24
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

27749..29137
DNA (1389bp) protein (463aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Asparagine--tRNA ligase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QR66_SPHPG
asparaginyl-tRNA synthetase
BSR_Lac_UAPBR_middle_p_131596_25
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(29252..29833)
DNA (582bp) protein (194aa)
Transcriptional regulator, LuxR family n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHZ8_SPICD
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEC02111.1}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_131596_26
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(29942..30595)
DNA (654bp) protein (218aa)
UPF0178 protein yaiI n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHZ9_SPICD
hypothetical protein
UPF0178 protein Spico_0888 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_131596_27
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(30601..33033)
DNA (2433bp) protein (811aa)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QR63_SPHPG
beta-galactosidase/beta-glucuronidase
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:AEV30998.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_131596_28
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

33387..35045
DNA (1659bp) protein (553aa)
Diphosphate--fructose-6-phosphate 1-phosphotransferase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QR62_SPHPG
diphosphate--fructose-6-phosphate 1-phosphotransferase
Diphosphate--fructose-6-phosphate 1-phosphotransferase {ECO:0000313|EMBL:AEV30997.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_131596_29
unknown

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comp(34961..35248)
DNA (288bp) protein (96aa)

This feature has no annotations

Displaying 29 items

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