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BSR_Lac_UAPBR_middle_p_85691

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_middle_p_85691_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_85691_2
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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147..1394
DNA (1248bp) protein (416aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXZ5_SPHGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY12419.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Lac_UAPBR_middle_p_85691_3

Not on your lists

comp(1415..2341)
DNA (927bp) protein (309aa)
TonB family protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY00_SPHGB
Marine sediment metagenome DNA, contig: S03H2_S01667 {ECO:0000313|EMBL:GAH52527.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
TonB family protein
BSR_Lac_UAPBR_middle_p_85691_4
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(2341..2736)
DNA (396bp) protein (132aa)
Biopolymer transport protein ExbD/TolR n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY01_SPHGB
biopolymertransporter ExbD/TolR
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_85691_5
unknown

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comp(2733..3113)
DNA (381bp) protein (127aa)
BSR_Lac_UAPBR_middle_p_85691_6
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3113..3727)
DNA (615bp) protein (205aa)
Biopolymer transport protein n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9ULH9_SPIAZ
biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:AFG38372.1}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
BSR_Lac_UAPBR_middle_p_85691_7
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3785..5773)
DNA (1989bp) protein (663aa)
Outer membrane cobalamin receptor protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUF8_SPHPG
outer membrane cobalamin receptor protein
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AEV29191.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_8
unknown

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comp(5952..6074)
DNA (123bp) protein (41aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_85691_trna_1
unknown

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comp(6373..6444)
DNA (72bp)
transferRNA Cys
BSR_Lac_UAPBR_middle_p_85691_9
unknown

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6548..7171
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RY34_SPHGB
hypothetical protein
BSR_Lac_UAPBR_middle_p_85691_10
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7405..8184
DNA (780bp) protein (260aa)
Transcriptional regulator of sugar metabolism n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUE5_SPHPG
sugar metabolism transcriptional regulator
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:AEV29178.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_11
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8235..9380
DNA (1146bp) protein (382aa)
Malate/lactate dehydrogenase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUE4_SPHPG
malate/lactate dehydrogenase
Malate/lactate dehydrogenase {ECO:0000313|EMBL:AEV29177.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_12
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9459..10748
DNA (1290bp) protein (430aa)
Malic enzyme n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUE3_SPHPG
malic enzyme
Malic enzyme {ECO:0000313|EMBL:AEV29176.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_13
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10891..11493)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUE2_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV29175.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_14
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11657..12349
DNA (693bp) protein (231aa)
Putative membrane protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QUE1_SPHPG
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEV29174.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_15
GWC2_Spirochaetes_52_13_curated, Spirochaetes, Bacteria

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12396..13664
DNA (1269bp) protein (423aa)
Alanyl-tRNA synthetase, class IIc id=4288283 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
alanyl-tRNA synthetase
Tax=GWC2_Spirochaetes_52_13_curated
BSR_Lac_UAPBR_middle_p_85691_16
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

13667..14365
DNA (699bp) protein (233aa)
SNARE associated Golgi protein-related protein id=4288285 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta coccoides genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
hypothetical protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_85691_17
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14387..15784)
DNA (1398bp) protein (466aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
Adenylosuccinate lyase n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTZ4_SPHPG
adenylosuccinate lyase
BSR_Lac_UAPBR_middle_p_85691_18
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16079..16789
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Succinispira mobilis RepID=UPI00035CC659
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADY13112.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Lac_UAPBR_middle_p_85691_19
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16837..17679
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GM01_SPICD
4-deoxy-L-threo-5-hexulose uronate isomerase
BSR_Lac_UAPBR_middle_p_85691_20
Bulleidia extructa, Bulleidia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17793..18593
DNA (801bp) protein (267aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.69)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Bulleidia extructa W1219 RepID=D2MQK3_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFC05272.1}; TaxID=679192 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Bulleidia.;" source="Bulleidia extructa W1219.;"
BSR_Lac_UAPBR_middle_p_85691_21
RIFOXYC1_FULL_Spirochaetes_54_7_curated, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(18785..19696)
DNA (912bp) protein (304aa)
Sugar phosphate isomerase/epimerase id=2697502 bin=GWC2_Planctomycetes_45_44 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
xylose isomerase domain-containing protein
Tax=RIFOXYC1_FULL_Spirochaetes_54_7_curated
BSR_Lac_UAPBR_middle_p_85691_22
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(19702..20763)
DNA (1062bp) protein (354aa)
Dehydrogenase-like protein id=4833335 bin=GWC2_Spirochaete_52_13 species=Blastopirellula marina genus=Blastopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes
oxidoreductase domain-containing protein
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_85691_23
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20760..22271)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QRA8_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV28761.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_24
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22292..22801)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QRA9_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV28762.1}; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_25
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22933..23943)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QRB0_SPHPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV28763.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_26
bacterium UASB270, Bacteria

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comp(23991..24944)
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000367AA2A
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:GAK56517.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
xylose isomerase domain-containing protein
BSR_Lac_UAPBR_middle_p_85691_27
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25232..26338)
DNA (1107bp) protein (369aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTZ3_SPHPG
spermidine/putrescine-binding periplasmic protein
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:AEV29169.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_28
Sphaerochaeta pleomorpha, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26627..27049
DNA (423bp) protein (141aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QTZ2_SPHPG
response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:AEV29168.1}; Flags: Precursor;; TaxID=158190 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes).;"
BSR_Lac_UAPBR_middle_p_85691_29
unknown

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comp(27038..27304)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 30 items

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