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BSR_Lac_UAPBR_middle_p_56611

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_middle_p_56611_1
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3..281)
DNA (279bp) protein (93aa)
Transposase n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H1ND33_SPIAZ
transposase
Transposase {ECO:0000313|EMBL:AFG36865.1}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692).;"
BSR_Lac_UAPBR_middle_p_56611_2
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(363..656)
DNA (294bp) protein (98aa)
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_56611_3
unknown

Not on your lists

comp(656..787)
DNA (132bp) protein (44aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_56611_4
unknown

Not on your lists

comp(1096..1434)
DNA (339bp) protein (113aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_56611_5
unknown

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1790..2077
DNA (288bp) protein (96aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_56611_6
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2164..2943
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE84862.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
Uncharacterized protein id=3739724 bin=GWF2_Bacteroidetes_39_10 species=Joostella marina genus=Joostella taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_39_10 organism_group=Bacteroidetes
BSR_Lac_UAPBR_middle_p_56611_7
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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3041..3634
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YXY2_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ35981.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicola DSM 2279.;"
BSR_Lac_UAPBR_middle_p_56611_8
unknown

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3665..4585
DNA (921bp) protein (307aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_56611_9
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(4588..5631)
DNA (1044bp) protein (348aa)
Integrase family protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RWL5_SPHGB
integrase
Integrase family protein {ECO:0000313|EMBL:ADY13646.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy); (Spirochaeta sp. (strain Buddy)).;"
BSR_Lac_UAPBR_middle_p_56611_trna_2
unknown

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comp(5853..5925)
DNA (73bp)
transferRNA Met
BSR_Lac_UAPBR_middle_p_56611_10
unknown

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comp(6066..6596)
DNA (531bp) protein (177aa)

This feature has no annotations

BSR_Lac_UAPBR_middle_p_56611_11
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7128..8063
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7AGV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54779.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
BSR_Lac_UAPBR_middle_p_56611_12
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8183..10465
DNA (2283bp) protein (761aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
methionine synthase (B12-independent) (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=3 Tax=unclassified Lachnospiraceae RepID=E5XHH8_9FIRM
BSR_Lac_UAPBR_middle_p_56611_13
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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10506..11621
DNA (1116bp) protein (372aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EFB74852.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EFB74852.1};; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Methionine synthase, vitamin-B12 independent n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PR05_9FIRM
hypothetical protein
BSR_Lac_UAPBR_middle_p_56611_14
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(11685..12791)
DNA (1107bp) protein (369aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036B66D7
GntR family transcriptional regulator
Transcriptional regulator, GntR family with LacI sensor {ECO:0000313|EMBL:ADK80964.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_Lac_UAPBR_middle_p_56611_15
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12927..13910
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003811BF7
LysR family transcriptional regulator
LysR substrate-binding protein {ECO:0000313|EMBL:ADK80965.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_Lac_UAPBR_middle_p_56611_16
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13994..16042
DNA (2049bp) protein (683aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI0003701D3E
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADK80966.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_Lac_UAPBR_middle_p_56611_17
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16029..17081
DNA (1053bp) protein (351aa)
ABC transporter (EC:3.6.3.30)
ABC transporter related protein {ECO:0000313|EMBL:ADK80967.1}; EC=3.6.3.30 {ECO:0000313|EMBL:ADK80967.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
ABC transporter related protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R6E9_SPISS
BSR_Lac_UAPBR_middle_p_56611_18
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17068..19371
DNA (2304bp) protein (768aa)
Glycogen debranching protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R6F0_SPISS
glycogen debranching protein
Glycogen debranching protein {ECO:0000313|EMBL:ADK80968.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
BSR_Lac_UAPBR_middle_p_56611_19
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(19475..20518)
DNA (1044bp) protein (348aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LN30_TREBD
ribonucleotide reductase
BSR_Lac_UAPBR_middle_p_56611_20
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20549..23068)
DNA (2520bp) protein (840aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
ribonucleoside-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LN31_TREBD
BSR_Lac_UAPBR_middle_p_56611_21
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23506..24840
DNA (1335bp) protein (445aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2ZFB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD62664.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
aminopeptidase C
BSR_Lac_UAPBR_middle_p_56611_22
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(24899..25699)
DNA (801bp) protein (267aa)
Zinc transporter ZupT n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXY2_SPHGB
Zinc transporter zupT
Tax=BJP_08E140C01_Spirochaeta_53_29
BSR_Lac_UAPBR_middle_p_56611_23
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25771..26109)
DNA (339bp) protein (113aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWP3_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH20858.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB; 10654).;"
BSR_Lac_UAPBR_middle_p_56611_24
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

26756..29167
DNA (2412bp) protein (804aa)
Ribonucleoside-triphosphate reductase class III catalytic subunit {ECO:0000313|EMBL:AEC02070.1}; EC=1.17.4.2 {ECO:0000313|EMBL:AEC02070.1};; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Ribonucleoside-triphosphate reductase class III catalytic subunit n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GHV7_SPICD
ribonucleoside-triphosphate reductase class III catalytic subunit
BSR_Lac_UAPBR_middle_p_56611_25
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29364..29729
DNA (366bp) protein (122aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNB7_9FIRM
anaerobic ribonucleoside-triphosphate reductase activating protein
BSR_Lac_UAPBR_middle_p_56611_26
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

29863..31614
DNA (1752bp) protein (584aa)
Alkaline phosphatase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GJX1_SPICD
alkaline phosphatase
Alkaline phosphatase {ECO:0000313|EMBL:AEC01396.1}; Flags: Precursor;; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_56611_27
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

31747..32169
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GJX2_SPICD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC01397.1}; Flags: Precursor;; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
BSR_Lac_UAPBR_middle_p_56611_28
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

32171..32890
DNA (720bp) protein (240aa)
Phosphonate-transporting ATPase {ECO:0000313|EMBL:AEC01398.1}; EC=3.6.3.28 {ECO:0000313|EMBL:AEC01398.1};; Flags: Precursor;; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Phosphonate-transporting ATPase n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GJX3_SPICD
phosphonate-transporting ATPase
BSR_Lac_UAPBR_middle_p_56611_29
Sphaerochaeta coccoides, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

32887..34161
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Spirochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1) RepID=F4GJX4_SPICD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC01399.1}; Flags: Precursor;; TaxID=760011 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta coccoides (strain ATCC BAA-1237 / DSM 17374 / SPN1); (Spirochaeta coccoides).;"
Displaying items 1-30 of 85 in total

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