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BSR_Lac_C_na_1_62503

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_C_na_1_62503_1
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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188..1312
-----------------
DNA (1125bp)
protein (375aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas putida S16 RepID=F8G5J0_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEJ13006.1}; TaxID=1042876 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain S16).;"
BSR_Lac_C_na_1_62503_2
Pseudomonas sp., Proteobacteria, Bacteria

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1320..2264
-----------------
DNA (945bp)
protein (315aa)
DNA recombinase n=1 Tax=Pseudomonas sp. S13.1.2 RepID=UPI0003045861
DNA recombinase; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
phage-related DNA recombination protein
BSR_Lac_C_na_1_62503_3

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2251..2880
-----------------
DNA (630bp)
protein (210aa)
hypothetical protein n=1 Tax=Pseudomonas sp. S13.1.2 RepID=UPI0002ED0542
Marine sediment metagenome DNA, contig: S06H3_C00338 {ECO:0000313|EMBL:GAH97030.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phage exonuclease
BSR_Lac_C_na_1_62503_4
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2877..3389
-----------------
DNA (513bp)
protein (171aa)
hypothetical protein n=1 Tax=Pseudomonas putida RepID=UPI0002E1719D
Uncharacterized protein {ECO:0000313|EMBL:KGK25524.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
hypothetical protein
BSR_Lac_C_na_1_62503_5
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3393..3557
-----------------
DNA (165bp)
protein (55aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida S610 RepID=V6J302_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:EST14222.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
BSR_Lac_C_na_1_62503_6
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3639..4004
-----------------
DNA (366bp)
protein (122aa)
Uncharacterized protein n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7DCU1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ESW39300.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
hypothetical protein
BSR_Lac_C_na_1_62503_7
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3979..4494
-----------------
DNA (516bp)
protein (172aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=A5W1Q4_PSEP1
Uncharacterized protein {ECO:0000313|EMBL:KGK25522.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
hypothetical protein
BSR_Lac_C_na_1_62503_8
Pseudomonas moraviensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4478..4852)
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein n=1 Tax=Pseudomonas moraviensis R28 RepID=V8RCE7_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ETF09791.1}; TaxID=1395516 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas moraviensis R28-S.;"
BSR_Lac_C_na_1_62503_9

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4959..5510
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6V0E8_9PSED
Marine sediment metagenome DNA, contig: S06H3_C00476 {ECO:0000313|EMBL:GAH98914.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
BSR_Lac_C_na_1_62503_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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5594..5944
-----------------
DNA (351bp)
protein (117aa)
hypothetical protein n=1 Tax=Pseudomonas monteilii RepID=UPI0003003203
Uncharacterized protein {ECO:0000313|EMBL:KIO49624.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
BSR_Lac_C_na_1_62503_11
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5963..6886
-----------------
DNA (924bp)
protein (308aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida LF54 RepID=U2UFL2_PSEPU
Uncharacterized protein {ECO:0000313|EMBL:ERL01837.1}; TaxID=1299319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida LF54.;"
DNA-cytosine methyltransferase
BSR_Lac_C_na_1_62503_12
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6934..7233)
-----------------
DNA (300bp)
protein (100aa)
hypothetical protein n=1 Tax=Pseudomonas sp. S13.1.2 RepID=UPI00035F5023
Uncharacterized protein {ECO:0000313|EMBL:KIY42722.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
hypothetical protein
BSR_Lac_C_na_1_62503_13
Pseudomonas sp. WCS358, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7416..8006
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Pseudomonas agarici RepID=UPI000315DA9A
Uncharacterized protein {ECO:0000313|EMBL:KEY87777.1}; TaxID=1495066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. WCS358.;"
hypothetical protein
BSR_Lac_C_na_1_62503_14
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8003..8356
-----------------
DNA (354bp)
protein (118aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas putida S16 RepID=F8G173_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHZ76030.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
BSR_Lac_C_na_1_62503_15
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8353..8910
-----------------
DNA (558bp)
protein (186aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=B0KKQ4_PSEPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN82877.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
BSR_Lac_C_na_1_62503_16
Pseudomonas sp. RIT357, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8954..9727
-----------------
DNA (774bp)
protein (258aa)
DNA adenine methyltransferase YhdJ {ECO:0000313|EMBL:EZP62656.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EZP62656.1};; TaxID=1470593 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. RIT357.;"
hypothetical protein n=1 Tax=Salmonella choleraesuis RepID=UPI0002B91BE7
prophage DNA methylase
BSR_Lac_C_na_1_62503_17
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9779..10516
-----------------
DNA (738bp)
protein (246aa)
serine/threonine protein phosphatase n=1 Tax=Pseudomonas monteilii RepID=UPI0002FD75A2
Phosphoprotein phosphatase {ECO:0000313|EMBL:ENY75655.1}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
phosphoprotein phosphatase
BSR_Lac_C_na_1_62503_18
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10532..10708
-----------------
DNA (177bp)
protein (59aa)
Uncharacterized protein n=2 Tax=Pseudomonas putida RepID=B0KKQ9_PSEPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN82881.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
BSR_Lac_C_na_1_62503_19
Pseudomonas sp. VLB120, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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11013..12194
-----------------
DNA (1182bp)
protein (394aa)
Integrase family protein n=1 Tax=Pseudomonas sp. VLB120 RepID=U5VC69_9PSED
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AGZ34583.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. VLB120.;"
BSR_Lac_C_na_1_62503_trna_1
unknown

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comp(12280..12353)
-----------------
DNA (74bp)
transferRNA Pro
BSR_Lac_C_na_1_62503_20
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12471..12827)
-----------------
DNA (357bp)
protein (119aa)
Transcriptional regulator, MerR family n=14 Tax=Pseudomonas RepID=A5W5D4_PSEP1
hypothetical protein
Putative MerR family transcriptional regulator {ECO:0000313|EMBL:BAN53775.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
BSR_Lac_C_na_1_62503_21
Pseudomonas sp. C5pp, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12808..13110)
-----------------
DNA (303bp)
protein (101aa)
Integration host factor subunit alpha n=22 Tax=Pseudomonas RepID=IHFA_PSEP1
integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1586081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. C5pp.;"
BSR_Lac_C_na_1_62503_22
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13115..15496)
-----------------
DNA (2382bp)
protein (794aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1227924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida TRO1.;"
phenylalanyl-tRNA synthetase n=1 Tax=Pseudomonas putida RepID=UPI0002FCA2EB
pheT; phenylalanyl-tRNA synthetase subunit beta
BSR_Lac_C_na_1_62503_23
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15530..16546)
-----------------
DNA (1017bp)
protein (339aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00281};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00281};; TaxID=160488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain KT2440).;"
Phenylalanine--tRNA ligase alpha subunit n=9 Tax=Pseudomonas putida RepID=SYFA_PSEP1
pheS; phenylalanyl-tRNA synthetase subunit alpha
BSR_Lac_C_na_1_62503_24
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16656..17012)
-----------------
DNA (357bp)
protein (119aa)
50S ribosomal protein L20 n=19 Tax=Pseudomonas RepID=RL20_PSEE4
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1042876 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain S16).;"
BSR_Lac_C_na_1_62503_25
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17040..17234)
-----------------
DNA (195bp)
protein (65aa)
50S ribosomal protein L35 n=21 Tax=Pseudomonas RepID=RL35_PSEE4
rpmI; protein RpmI
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1299319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida LF54.;"
BSR_Lac_C_na_1_62503_26
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17297..17848)
-----------------
DNA (552bp)
protein (184aa)
Translation initiation factor IF-3 n=5 Tax=Pseudomonas RepID=F8G059_PSEPU
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
BSR_Lac_C_na_1_62503_27
Pseudomonas sp. FGI182, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17848..19770)
-----------------
DNA (1923bp)
protein (641aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1259844 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FGI182.;"
Threonine--tRNA ligase n=1 Tax=Pseudomonas putida S16 RepID=F8G058_PSEPU
threonyl-tRNA synthetase
BSR_Lac_C_na_1_62503_28
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20108..20413
-----------------
DNA (306bp)
protein (102aa)
hypothetical protein n=1 Tax=Pseudomonas monteilii RepID=UPI000318F5EB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY99373.1}; Flags: Precursor;; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
BSR_Lac_C_na_1_62503_29
Pseudomonas sp. FGI182, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20576..20788
-----------------
DNA (213bp)
protein (71aa)
Cold-shock DNA-binding protein family n=16 Tax=Pseudomonas RepID=A5W5E3_PSEP1
cold shock protein CspA
Cold-shock protein {ECO:0000313|EMBL:AHD13962.1}; TaxID=1259844 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. FGI182.;"
Displaying items 1-30 of 38 in total

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