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BSR_Lac_C_na_1_95385

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_C_na_1_95385_1
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..108
-----------------
DNA (108bp)
protein (36aa)
ABC transporter permease n=1 Tax=Pseudomonas sp. CBZ-4 RepID=UPI00034D8C2A
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KIF59538.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
BSR_Lac_C_na_1_95385_2
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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108..593
-----------------
DNA (486bp)
protein (162aa)
Organic solvent ABC transporter substrate-binding protein n=2 Tax=Pseudomonas putida RepID=R9V2E2_PSEPU
organic solvent ABC transporter substrate-binding protein
Organic solvent ABC transporter substrate-binding protein {ECO:0000313|EMBL:AGN77935.1}; TaxID=1331671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida H8234.;"
BSR_Lac_C_na_1_95385_3
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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603..1250
-----------------
DNA (648bp)
protein (216aa)
toluene tolerance protein n=1 Tax=Pseudomonas monteilii RepID=UPI0002E7E70B
Toluene tolerance protein {ECO:0000313|EMBL:KIY41401.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
toluene tolerance family protein
BSR_Lac_C_na_1_95385_4
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1268..1549
-----------------
DNA (282bp)
protein (94aa)
anti-sigma factor antagonist n=1 Tax=Pseudomonas putida group RepID=UPI00037FA87D
toluene tolerance protein Ttg2E
Anti-sigma factor antagonist {ECO:0000313|EMBL:KGK23971.1}; Toluene tolerance protein Ttg2E {ECO:0000313|EMBL:AJG15514.1}; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
BSR_Lac_C_na_1_95385_5
Pseudomonas sp. VLB120, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1667..1906
-----------------
DNA (240bp)
protein (80aa)
BolA family protein n=19 Tax=Pseudomonas RepID=A5VZ53_PSEP1
BolA family transcriptional regulator
BolA family protein {ECO:0000313|EMBL:AGZ36842.1}; TaxID=69328 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. VLB120.;"
BSR_Lac_C_na_1_95385_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1930..3195
-----------------
DNA (1266bp)
protein (422aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00111}; EC=2.5.1.7 {ECO:0000255|HAMAP-Rule:MF_00111};; Enoylpyruvate transferase {ECO:0000255|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000255|HAMAP-Rule:MF_00111}; Short=EPT {ECO:0000255|HAMAP-Rule:MF_00111};; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Pseudomonas putida group RepID=UPI00031250EA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
BSR_Lac_C_na_1_95385_7
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3287..3922
-----------------
DNA (636bp)
protein (212aa)
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01018}; Short=ATP-PRT {ECO:0000255|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000255|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000255|HAMAP-Rule:MF_01018};; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
ATP phosphoribosyltransferase n=1 Tax=Pseudomonas putida group RepID=UPI000313A3D8
BSR_Lac_C_na_1_95385_8
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4049..5374
-----------------
DNA (1326bp)
protein (442aa)
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
histidinol dehydrogenase n=1 Tax=Pseudomonas monteilii RepID=UPI000317BA4C
BSR_Lac_C_na_1_95385_9
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5377..6423
-----------------
DNA (1047bp)
protein (349aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
histidinol-phosphate aminotransferase n=1 Tax=Pseudomonas putida group RepID=UPI0002FBE3D9
histidinol-phosphate aminotransferase
BSR_Lac_C_na_1_95385_10
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6464..7648)
-----------------
DNA (1185bp)
protein (395aa)
hypothetical protein n=1 Tax=Pseudomonas monteilii RepID=UPI00037EB88D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN56193.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
BSR_Lac_C_na_1_95385_11
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7789..8439
-----------------
DNA (651bp)
protein (217aa)
GntR family transcriptional regulator n=1 Tax=Pseudomonas putida RepID=UPI0002E02D49
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:ABY96886.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
BSR_Lac_C_na_1_95385_12
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8453..9733
-----------------
DNA (1281bp)
protein (427aa)
MFS transporter n=1 Tax=Pseudomonas monteilii RepID=UPI0002F3024B
putative major facilitator superfamily transporter
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:BAN56191.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
BSR_Lac_C_na_1_95385_13
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9911..10387
-----------------
DNA (477bp)
protein (159aa)
ketosteroid isomerase n=1 Tax=Pseudomonas putida group RepID=UPI0002D35141
Ketosteroid isomerase {ECO:0000313|EMBL:AJQ48895.1}; TaxID=1384061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S13.1.2.;"
hypothetical protein
BSR_Lac_C_na_1_95385_14
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10380..10721
-----------------
DNA (342bp)
protein (114aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida NBRC 14164 RepID=T2HBA2_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN56189.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
BSR_Lac_C_na_1_95385_15
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10669..11676)
-----------------
DNA (1008bp)
protein (336aa)
nucleoid-associated protein n=1 Tax=Pseudomonas putida RepID=UPI0002D7FCDF
nucleoid-associated protein NdpA
Nucleoid-associated protein PputGB1_0980 {ECO:0000255|HAMAP-Rule:MF_00730}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
BSR_Lac_C_na_1_95385_16
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12047..12328
-----------------
DNA (282bp)
protein (94aa)
Histone family protein DNA-binding protein n=16 Tax=Pseudomonas RepID=A5VZ64_PSEP1
histone family protein DNA-binding protein
Bacterial DNA-binding family protein {ECO:0000313|EMBL:EST16674.1}; TaxID=1399145 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S610.;"
BSR_Lac_C_na_1_95385_17
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12379..13329)
-----------------
DNA (951bp)
protein (317aa)
rlmF; 23S rRNA methyltransferase RlmF (EC:2.1.1.181)
Ribosomal RNA large subunit methyltransferase F {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036602}; EC=2.1.1.181 {ECO:0000256|HAMAP-Rule:MF_01848, ECO:0000256|SAAS:SAAS00036596};; 23S rRNA mA1618 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; rRNA adenine N-6-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01848}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
16S rRNA methyltransferase n=1 Tax=Pseudomonas monteilii RepID=UPI000312BEB5
BSR_Lac_C_na_1_95385_18
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13493..16339)
-----------------
DNA (2847bp)
protein (949aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
valyl-tRNA synthetase n=1 Tax=Pseudomonas putida RepID=UPI0002DCEE10
valyl-tRNA synthetase
BSR_Lac_C_na_1_95385_19
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16550..16915)
-----------------
DNA (366bp)
protein (122aa)
hypothetical protein n=1 Tax=Pseudomonas putida group RepID=UPI0002D4A8AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY96894.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
BSR_Lac_C_na_1_95385_20
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16921..17376)
-----------------
DNA (456bp)
protein (152aa)
DNA polymerase III subunit chi (EC:2.7.7.7)
DNA-directed DNA polymerase {ECO:0000313|EMBL:ABY96895.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABY96895.1};; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
DNA polymerase III subunit chi n=1 Tax=Pseudomonas monteilii RepID=UPI00030578E2
BSR_Lac_C_na_1_95385_21
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17400..18893)
-----------------
DNA (1494bp)
protein (498aa)
leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; EC=3.4.11.1 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucine aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; Short=LAP {ECO:0000255|HAMAP-Rule:MF_00181};; EC=3.4.11.10 {ECO:0000255|HAMAP-Rule:MF_00181};; Leucyl aminopeptidase {ECO:0000255|HAMAP-Rule:MF_00181}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
multifunctional aminopeptidase A n=1 Tax=Pseudomonas monteilii RepID=UPI0002D50136
BSR_Lac_C_na_1_95385_22
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18908..19198
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein n=1 Tax=Pseudomonas putida group RepID=UPI00036373C7
Uncharacterized protein {ECO:0000313|EMBL:KIY41419.1}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
hypothetical protein
BSR_Lac_C_na_1_95385_23
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19195..20310
-----------------
DNA (1116bp)
protein (372aa)
permease n=1 Tax=Pseudomonas putida group RepID=UPI0002EB592E
putative ABC transporter permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAN56181.1}; TaxID=1211579 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida NBRC 14164.;"
BSR_Lac_C_na_1_95385_24
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20303..21364
-----------------
DNA (1062bp)
protein (354aa)
permease n=1 Tax=Pseudomonas putida group RepID=UPI0003094139
YjgP/YjgQ family permease
Permease YjgP/YjgQ family protein {ECO:0000313|EMBL:ABY96898.1}; Flags: Precursor;; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain GB-1).;"
BSR_Lac_C_na_1_95385_25
Pseudomonas sp. TJI-51, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21428..21916)
-----------------
DNA (489bp)
protein (163aa)
RDD domain-containing protein n=1 Tax=Pseudomonas sp. (strain TJI-51) RepID=F0EEZ6_PSEDT
RDD domain-containing protein {ECO:0000313|EMBL:EGB95016.1}; TaxID=985010 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain TJI-51).;"
RDD domain-containing protein
BSR_Lac_C_na_1_95385_26
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22008..22220)
-----------------
DNA (213bp)
protein (71aa)
Cold-shock DNA-binding domain-containing protein n=6 Tax=Pseudomonas RepID=F8FX85_PSEPU
cold-shock DNA-binding domain-containing protein
Cold-shock protein {ECO:0000313|EMBL:ESW39264.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
BSR_Lac_C_na_1_95385_27
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22579..23700)
-----------------
DNA (1122bp)
protein (374aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=70775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida.;"
glycine cleavage system protein T n=1 Tax=Pseudomonas monteilii RepID=UPI0002FE1EF4
glycine cleavage system T protein
BSR_Lac_C_na_1_95385_28
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(23728..25104)
-----------------
DNA (1377bp)
protein (459aa)
serine dehydratase n=1 Tax=Pseudomonas putida RepID=UPI0002F68E64
Serine dehydratase {ECO:0000313|EMBL:ERL02922.1}; TaxID=1299319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida LF54.;"
sda-2; L-serine dehydratase 1
BSR_Lac_C_na_1_95385_29
Pseudomonas sp. 10-1B, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25270..28125)
-----------------
DNA (2856bp)
protein (952aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1546029 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 10-1B.;"
glycine dehydrogenase (EC:1.3.1.74)
glycine dehydrogenase n=1 Tax=Pseudomonas monteilii RepID=UPI0002D7B94C
BSR_Lac_C_na_1_95385_30
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(28137..28460)
-----------------
DNA (324bp)
protein (108aa)
Glycine cleavage system H protein n=7 Tax=Pseudomonas putida RepID=A5VZ77_PSEP1
Glycine cleavage system H protein 1
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=351746 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain F1 / ATCC 700007).;"
Displaying 30 items

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