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BSR_Ace_LFCR_na_p_1_52574

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_LFCR_na_p_1_52574_1
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(196..4467)
DNA (4272bp) protein (1424aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
DNA-directed RNA polymerase subunit beta' n=2 Tax=Porphyromonadaceae RepID=G9S4A0_9PORP
DNA-directed RNA polymerase subunit beta'
BSR_Ace_LFCR_na_p_1_52574_2
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4600..8412)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
DNA-directed RNA polymerase subunit beta n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CDW8_9PORP
DNA-directed RNA polymerase subunit beta
BSR_Ace_LFCR_na_p_1_52574_3
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8517..8891)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=3 Tax=Porphyromonadaceae RepID=G9S4A2_9PORP
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
50S ribosomal protein L12
BSR_Ace_LFCR_na_p_1_52574_4
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8926..9441)
DNA (516bp) protein (172aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AI01_9PORP
Large subunit ribosomal protein L10 {ECO:0000313|EMBL:EOS13181.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
50S ribosomal protein L10
BSR_Ace_LFCR_na_p_1_52574_5
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9458..10156)
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=3 Tax=Parabacteroides RepID=K5ZI34_9PORP
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
rplA; 50S ribosomal protein L1
BSR_Ace_LFCR_na_p_1_52574_6
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10173..10601)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=1 Tax=Tannerella sp. CAG:118 RepID=R5IFQ6_9PORP
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
rplK; 50S ribosomal protein L11
BSR_Ace_LFCR_na_p_1_52574_7
Bacteroides intestinalis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10660..11202)
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=1 Tax=Bacteroides intestinalis DSM 17393 RepID=B3C860_9BACE
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=471870 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides intestinalis DSM 17393.;"
transcription antitermination protein nusG
BSR_Ace_LFCR_na_p_1_52574_8
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11219..11413)
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=3 Tax=Parabacteroides RepID=K5YN83_9PORP
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
preprotein translocase subunit SecE
BSR_Ace_LFCR_na_p_1_52574_trna_5
unknown

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comp(11431..11503)
DNA (73bp)
transferRNA Trp
BSR_Ace_LFCR_na_p_1_52574_9
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11552..12739)
DNA (1188bp) protein (396aa)
Elongation factor Tu n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JD07_9BACT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
translation elongation factor 1a (ef-1a/ef-tu)
BSR_Ace_LFCR_na_p_1_52574_trna_4
unknown

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comp(12784..12855)
DNA (72bp)
transferRNA Thr
BSR_Ace_LFCR_na_p_1_52574_trna_3
unknown

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comp(12865..12937)
DNA (73bp)
transferRNA Gly
BSR_Ace_LFCR_na_p_1_52574_trna_2
unknown

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comp(12990..13072)
DNA (83bp)
transferRNA Tyr
BSR_Ace_LFCR_na_p_1_52574_trna_1
unknown

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comp(13149..13222)
DNA (74bp)
transferRNA Thr
BSR_Ace_LFCR_na_p_1_52574_10
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13317..13613)
DNA (297bp) protein (99aa)
Ribosomal subunit interface protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y9R9_9BACE
Ribosomal subunit interface protein {ECO:0000313|EMBL:KKB59351.1}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
raiA; ribosomal subunit interface protein
BSR_Ace_LFCR_na_p_1_52574_11
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13626..14507)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=2 Tax=Bacteroides caccae RepID=A5ZBF5_9BACE
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
tyrosine type site-specific recombinase
BSR_Ace_LFCR_na_p_1_52574_12
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14577..14768)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J014_9PORP
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
rpsU; 30S ribosomal protein S21
BSR_Ace_LFCR_na_p_1_52574_13
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15182..17059
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8Z4E0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY70285.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_52574_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17099..17788
DNA (690bp) protein (230aa)
DNA repair protein RadC n=4 Tax=Bacteroidales RepID=D7IUY8_9BACE
DNA repair protein
DNA repair protein RadC {ECO:0000313|EMBL:EKN23915.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
BSR_Ace_LFCR_na_p_1_52574_15
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(17905..18045)
DNA (141bp) protein (47aa)
ABC transporter, ATP-binding protein id=3591096 bin=GWC2_Bacteroidetes_46_850 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
ABC transporter
Tax=GWC2_Bacteroidetes_46_850_curated
BSR_Ace_LFCR_na_p_1_52574_16
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18462..20378)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2BAM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS13282.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_52574_17
bacterium UASB270, Bacteria

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comp(20375..21937)
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Y8_PALPW
Uncharacterized protein {ECO:0000313|EMBL:GAK59306.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_52574_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21930..23648)
DNA (1719bp) protein (573aa)
Uncharacterized protein n=3 Tax=root RepID=B0MYH1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02549.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_52574_19
bacterium UASB270, Bacteria

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comp(23654..24808)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T1Y6_PALPW
Uncharacterized protein {ECO:0000313|EMBL:GAK59304.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_52574_20
unknown

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comp(25364..25558)
DNA (195bp) protein (65aa)

This feature has no annotations

BSR_Ace_LFCR_na_p_1_52574_21
unknown

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comp(25850..26140)
DNA (291bp) protein (97aa)

This feature has no annotations

BSR_Ace_LFCR_na_p_1_52574_22
unknown

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26379..26564
DNA (186bp) protein (62aa)

This feature has no annotations

BSR_Ace_LFCR_na_p_1_52574_23
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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26622..27893
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRD5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH56463.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_52574_24
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(27853..29115)
DNA (1263bp) protein (421aa)
O-antigen translocase id=1789984 bin=GWB2_Bacteroidetes_32_14 species=Arcobacter butzleri genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
polysaccharide biosynthesis protein
Tax=GWD2_Bacteroidetes_33_33_curated
BSR_Ace_LFCR_na_p_1_52574_25
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(29109..29975)
DNA (867bp) protein (289aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2L5_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78959.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Displaying items 1-30 of 45 in total

View Taxonomy