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BSR_Ace_LFCR_na_p_1_68519

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_LFCR_na_p_1_68519_1
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(819..1748)
DNA (930bp) protein (310aa)
Transcriptional regulator AraC family n=1 Tax=Tannerella sp. CAG:118 RepID=R5ILI2_9PORP
Transcriptional regulator AraC family {ECO:0000313|EMBL:CCY37566.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_68519_2
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2021..3082
DNA (1062bp) protein (354aa)
Efflux transporter RND family MFP subunit n=1 Tax=Alistipes sp. CAG:268 RepID=R6VHD6_9BACT
RND transporter
RND transporter {ECO:0000313|EMBL:AHF13024.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
BSR_Ace_LFCR_na_p_1_68519_3
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3082..6270
DNA (3189bp) protein (1063aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EAFBDD
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDD31546.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
multidrug transporter AcrB
BSR_Ace_LFCR_na_p_1_68519_4
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6367..7677
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI0003824AF1
Outer membrane efflux protein {ECO:0000313|EMBL:CDD31547.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_68519_5
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8066..9295)
DNA (1230bp) protein (410aa)
isocitrate dehydrogenase (nadp) (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T399_PALPW
BSR_Ace_LFCR_na_p_1_68519_6
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9468..10829)
DNA (1362bp) protein (454aa)
Citrate synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T397_PALPW
citrate synthase
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
BSR_Ace_LFCR_na_p_1_68519_7
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10853..13105)
DNA (2253bp) protein (751aa)
Aconitase {ECO:0000313|EMBL:ADQ79190.1}; EC=4.2.1.3 {ECO:0000313|EMBL:ADQ79190.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
aconitase (EC:4.2.1.3)
Aconitase id=2058389 bin=GWE2_Gammaproteobacteria_37_16 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Gammaproteobacteria_37_16 organism_group=Gammaproteobacteria organism_desc=Looks good, but small
BSR_Ace_LFCR_na_p_1_68519_8
Tannerella sp. 6_1_58FAA_CT1, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13615..15096
DNA (1482bp) protein (494aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=665949 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. 6_1_58FAA_CT1.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WR15_9PORP
BSR_Ace_LFCR_na_p_1_68519_9
Odoribacter splanchnicus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15199..15594
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Odoribacter RepID=F9Z9W5_ODOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY33186.1}; Flags: Precursor;; TaxID=709991 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter splanchnicus (strain ATCC 29572 / DSM 20712 / JCM 15291 /; NCTC 10825 / 1651/6) (Bacteroides splanchnicus).;"
BSR_Ace_LFCR_na_p_1_68519_10
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15921..17021
DNA (1101bp) protein (367aa)
LAO/AO transport system ATPase n=2 Tax=Bacteroides RepID=I9GWT5_9BACE
arginine/ornithine transport system ATPase
LAO/AO transport system ATPase {ECO:0000313|EMBL:EIY51584.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
BSR_Ace_LFCR_na_p_1_68519_11
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17087..18247
DNA (1161bp) protein (387aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5ZJH9_9PORP
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDN84938.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
purple acid phosphatase
BSR_Ace_LFCR_na_p_1_68519_12
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18302..18763)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5C4G4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY64654.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
N-acetyltransferase GCN5
BSR_Ace_LFCR_na_p_1_68519_13
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18854..19609)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02696.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
BSR_Ace_LFCR_na_p_1_68519_14
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(19612..21555)
DNA (1944bp) protein (648aa)
Succinate dehydrogenase {ECO:0000313|EMBL:KHM48128.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KHM48128.1};; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5INH1_9PORP
sdhA; succinate dehydrogenase flavoprotein subunit
BSR_Ace_LFCR_na_p_1_68519_15
Porphyromonas sp. COT-108 OH1349, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21600..22292)
DNA (693bp) protein (231aa)
Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family n=2 Tax=Porphyromonas asaccharolytica RepID=F4KLE5_PORAD
Succinate dehydrogenase {ECO:0000313|EMBL:KGN70602.1}; TaxID=1537504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-108 OH1349.;"
succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family
BSR_Ace_LFCR_na_p_1_68519_16
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(22341..23477)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU74_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY97431.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_68519_17
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(23504..23887)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B1J1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS12871.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_68519_18
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24012..25886)
DNA (1875bp) protein (625aa)
ATP-binding cassette, subfamily F, uup n=2 Tax=Parabacteroides RepID=N2BAI2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB45561.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
ABC transporter ATP-binding protein
BSR_Ace_LFCR_na_p_1_68519_19
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26012..26485)
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Dysgonomonas RepID=F8WX49_9PORP
rRNA large subunit methyltransferase
BSR_Ace_LFCR_na_p_1_68519_20
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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26885..27286
DNA (402bp) protein (134aa)
Putative uncharacterized protein id=4649922 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_31_9_curated
BSR_Ace_LFCR_na_p_1_68519_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27267..28112
DNA (846bp) protein (282aa)
nadC; putative nicotinate-nucleotide pyrophosphorylase [carboxylating] (quinolinate phosphoribosyltransferase [decarboxylating]) (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:EXY70926.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EXY70926.1};; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
Nicotinate-nucleotide pyrophosphorylase n=12 Tax=Bacteroides RepID=Q64WA6_BACFR
BSR_Ace_LFCR_na_p_1_68519_22
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28219..28692
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002EB1049
Uncharacterized protein {ECO:0000313|EMBL:EHB91966.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
GCN5-related N-acetyltransferase
BSR_Ace_LFCR_na_p_1_68519_23
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28721..31381
DNA (2661bp) protein (887aa)
beta-glucosidase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DC0D
Periplasmic beta-glucosidase {ECO:0000313|EMBL:GAF03168.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharicrinis fermentans DSM 9555 = JCM 21142.;"
glucan 1,4-alpha-glucosidase
BSR_Ace_LFCR_na_p_1_68519_24
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31407..31862
DNA (456bp) protein (152aa)
Antibiotic biosynthesis monooxygenase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0T9F0_9BACE
Antibiotic biosynthesis monooxygenase {ECO:0000313|EMBL:EEY85152.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_68519_25
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31870..32709
DNA (840bp) protein (280aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=742727 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E380_9BACE
BSR_Ace_LFCR_na_p_1_68519_26

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32775..35156
DNA (2382bp) protein (794aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036D599E
Uncharacterized protein {ECO:0000313|EMBL:KKN84086.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alpha-1,2-mannosidase
BSR_Ace_LFCR_na_p_1_68519_27
Prevotella melaninogenica, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(35483..36310)
DNA (828bp) protein (276aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=575612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella melaninogenica D18.;"
cdsA; phosphatidate cytidylyltransferase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Prevotella multiformis DSM 16608 RepID=F0F971_9BACT
BSR_Ace_LFCR_na_p_1_68519_28
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36310..37029)
DNA (720bp) protein (240aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=F3PEF2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB83997.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_68519_29
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(37258..37716)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R0G9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR11577.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
N-acetyltransferase GCN5
BSR_Ace_LFCR_na_p_1_68519_trna_3
unknown

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comp(37787..37868)
DNA (82bp)
transferRNA Leu
Displaying items 1-30 of 38 in total

View Taxonomy