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BSR_Ace_LFCR_na_p_1_94294

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_LFCR_na_p_1_94294_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..178
DNA (177bp) protein (59aa)
Efflux ABC transporter permease protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XEK1_9PORP
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD14771.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter permease
BSR_Ace_LFCR_na_p_1_94294_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

243..923
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZZ96_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB53745.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii DSM 19448 = WAL 12034.;"
ABC transporter ATP-binding protein
BSR_Ace_LFCR_na_p_1_94294_3
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(982..1464)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6ISC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ETK07549.1}; TaxID=1411021 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 6/7/9.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_94294_4
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1461..3620)
DNA (2160bp) protein (720aa)
Putative uncharacterized protein n=2 Tax=Dysgonomonas RepID=F8X2C9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05945.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_94294_5
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4155..4556
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K6AYB2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN33019.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_94294_6
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4618..6402)
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8X1I5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK05969.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
glycoside hydrolase
BSR_Ace_LFCR_na_p_1_94294_7
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6416..8581)
DNA (2166bp) protein (722aa)
putative trehalose-6-phosphate synthase (EC:2.4.1.15)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J165_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00808.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
BSR_Ace_LFCR_na_p_1_94294_8
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8995..12504
DNA (3510bp) protein (1170aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y473_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKB50798.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
outer membrane assembly protein
BSR_Ace_LFCR_na_p_1_94294_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12625..14175)
DNA (1551bp) protein (517aa)
YjeF domain protein n=7 Tax=Bacteroidales RepID=C7XCT7_9PORP
sugar kinase
YjeF-related family protein {ECO:0000313|EMBL:KDS62993.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
BSR_Ace_LFCR_na_p_1_94294_trna_1
unknown

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14368..14441
DNA (74bp)
transferRNA Arg
BSR_Ace_LFCR_na_p_1_94294_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(15479..16030)
DNA (552bp) protein (184aa)
Methyladenine glycosylase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C9K3_SPHS2
methyladenine glycosylase
Methyladenine glycosylase {ECO:0000313|EMBL:ADZ80887.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
BSR_Ace_LFCR_na_p_1_94294_11
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(16091..16375)
DNA (285bp) protein (95aa)
Putative uncharacterized protein id=2989539 bin=GWF1_Spirochaetes_60_12 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF1_Spirochaetes_60_12 organism_group=Spirochaetes
Uncharacterized protein {ECO:0000313|EMBL:KIA86777.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_94294_12
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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16812..17123
DNA (312bp) protein (104aa)
Helix-turn-helix domain protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EXB8_EMTOG
helix-turn-helix domain protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AFK04321.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
BSR_Ace_LFCR_na_p_1_94294_13
Halobacillus halophilus, Halobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17942..18805
DNA (864bp) protein (288aa)
Short-chain dehydrogenase/reductase family protein n=1 Tax=Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 / NBRC 102448/ NCIMB 2269) RepID=I0JLC7_HALH3
short-chain dehydrogenase/reductase family protein
Short-chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CCG44947.1}; TaxID=866895 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Halobacillus.;" source="Halobacillus halophilus (strain ATCC 35676 / DSM 2266 / JCM 20832 /; NBRC 102448/ NCIMB 2269) (Sporosarcina halophila).;"
BSR_Ace_LFCR_na_p_1_94294_14
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19717..20109)
DNA (393bp) protein (131aa)
Putative uncharacterized protein id=3997500 bin=GWC2_Bacteroidetes_33_15 species=Dysgonomonas gadei genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_33_15 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
BSR_Ace_LFCR_na_p_1_94294_15
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20927..21217)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:118 RepID=R5IIY0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM49040.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_94294_16
Bacteroides sp. CAG:530, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21214..22218)
DNA (1005bp) protein (335aa)
DNA replication and repair protein RecF n=1 Tax=Bacteroides sp. CAG:530 RepID=R6DK51_9BACE
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262741 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:530.;"
refC; putative DNA replication and repair protein
BSR_Ace_LFCR_na_p_1_94294_17
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22437..24533)
DNA (2097bp) protein (699aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IXR9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK01738.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_94294_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24639..26594)
DNA (1956bp) protein (652aa)
Membrane protein insertase YidC n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IWG3_9BACE
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
inner membrane protein translocase component YidC
BSR_Ace_LFCR_na_p_1_94294_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26619..28229)
DNA (1611bp) protein (537aa)
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
CTP synthase n=6 Tax=Bacteroidales RepID=C7XA70_9PORP
BSR_Ace_LFCR_na_p_1_94294_20
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28430..29800)
DNA (1371bp) protein (457aa)
Putative oxalate:formate antiporter n=1 Tax=Tannerella sp. CAG:118 RepID=R5IC56_9PORP
Putative oxalate:formate antiporter {ECO:0000313|EMBL:CCY37899.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:118.;"
oxalate:formate antiporter
BSR_Ace_LFCR_na_p_1_94294_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30026..31021)
DNA (996bp) protein (332aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LF95_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN26543.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
BSR_Ace_LFCR_na_p_1_94294_22
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31067..32062)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5D8Z1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76668.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
BSR_Ace_LFCR_na_p_1_94294_23
unknown

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comp(32078..32599)
DNA (522bp) protein (174aa)

This feature has no annotations

BSR_Ace_LFCR_na_p_1_94294_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32592..33131)
DNA (540bp) protein (180aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z3D0_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN10079.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA polymerase ECF-type sigma factor
BSR_Ace_LFCR_na_p_1_94294_25
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(33285..33869)
DNA (585bp) protein (195aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
Peptidyl-prolyl cis-trans isomerase n=3 Tax=Parabacteroides merdae RepID=A7AK29_9PORP
peptidyl-prolyl cis-trans isomerase SlyD
BSR_Ace_LFCR_na_p_1_94294_26
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33885..35084)
DNA (1200bp) protein (400aa)
Cystathionine beta-lyase n=1 Tax=Coprobacter fastidiosus NSB1 RepID=U5CGJ6_9PORP
Cystathionine beta-lyase {ECO:0000313|EMBL:ERM88101.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
class I and II aminotransferase
BSR_Ace_LFCR_na_p_1_94294_27
Alistipes sp. CAG:831, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35160..35456)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:831 RepID=R5I6V8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY37725.1}; TaxID=1262698 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:831.;"
heavy-metal binding protein
BSR_Ace_LFCR_na_p_1_94294_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35699..37216)
DNA (1518bp) protein (506aa)
TrkA C-terminal domain protein n=3 Tax=Parabacteroides RepID=A7A9V5_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:CDD14858.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
cvrA, nhaP2, ycgO; potassium/proton antiporter
BSR_Ace_LFCR_na_p_1_94294_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37287..38126)
DNA (840bp) protein (280aa)
OmpA family protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJX3_9BACE
flagellar motor protein MotB
Uncharacterized protein {ECO:0000313|EMBL:EKN24642.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Displaying items 1-30 of 72 in total

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