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BSR_Lac_UAPBR_inlet_p_1_17316

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Lac_UAPBR_inlet_p_1_17316_1
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..430)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:505 RepID=R7AJ40_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD60853.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
BSR_Lac_UAPBR_inlet_p_1_17316_2
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(537..1277)
DNA (741bp) protein (247aa)
Metal dependent hydrolase n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q893D2_CLOTE
Metal dependent hydrolase {ECO:0000313|EMBL:CEN95144.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
metal dependent hydrolase
BSR_Lac_UAPBR_inlet_p_1_17316_3
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1374..1730)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KQJ5_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK97277.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Lac_UAPBR_inlet_p_1_17316_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1888..2958)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Clostridium botulinum (strain 657 / Type Ba4) RepID=C3KSU7_CLOB6
Uncharacterized protein {ECO:0000313|EMBL:AJD29282.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_p_1_17316_5
unknown

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comp(3149..4069)
DNA (921bp) protein (307aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_p_1_17316_6
unknown

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comp(4204..4815)
DNA (612bp) protein (204aa)

This feature has no annotations

BSR_Lac_UAPBR_inlet_p_1_17316_7
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4917..5945)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XUF7_DESHA
Uncharacterized protein {ECO:0000313|EMBL:KJS20682.1}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_p_1_17316_8
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(6432..7823)
DNA (1392bp) protein (464aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AF27_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCX40469.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
RNA methyltransferase, TrmA family
BSR_Lac_UAPBR_inlet_p_1_17316_9
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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comp(7798..8427)
DNA (630bp) protein (210aa)
CRISPR-associated protein Cas4 n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QA49_9FIRM
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:CDC29934.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
CRISPR-associated protein Cas4
BSR_Lac_UAPBR_inlet_p_1_17316_10
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(8420..8716)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AMF7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX40471.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_p_1_17316_11
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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comp(8729..9673)
DNA (945bp) protein (315aa)
Metal dependent phosphohydrolase n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AHZ3_9FIRM
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CCX40472.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
metal dependent phosphohydrolase
BSR_Lac_UAPBR_inlet_p_1_17316_12
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

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9873..10994
DNA (1122bp) protein (374aa)
Copper amine oxidase N-domain superfamily n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ACQ5_9FIRM
Copper amine oxidase N-domain superfamily {ECO:0000313|EMBL:CCX40473.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
BSR_Lac_UAPBR_inlet_p_1_17316_13
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11055..11363)
DNA (309bp) protein (103aa)
Putative transcriptional regulator n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XUL2_9FIRM
Putative transcriptional regulator {ECO:0000313|EMBL:EHQ89030.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
transcriptional regulator
BSR_Lac_UAPBR_inlet_p_1_17316_14
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11509..11748
DNA (240bp) protein (80aa)
Sporulation initiation factor Spo0A n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XUL3_9FIRM
Sporulation initiation factor Spo0A {ECO:0000313|EMBL:EHQ89031.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
Sporulation initiation factor Spo0A C terminal
BSR_Lac_UAPBR_inlet_p_1_17316_15
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(11880..13625)
DNA (1746bp) protein (582aa)
Ammonium transporter n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LNJ2_TREBD
ammonium transporter
Ammonium transporter {ECO:0000313|EMBL:AEE15846.1}; Flags: Precursor;; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
BSR_Lac_UAPBR_inlet_p_1_17316_16
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

14347..15123
DNA (777bp) protein (259aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5AIM7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
sigG; RNA polymerase sigma-G factor
BSR_Lac_UAPBR_inlet_p_1_17316_17
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

15257..15799
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6R689_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29802.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
isochorismatase
BSR_Lac_UAPBR_inlet_p_1_17316_18
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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16100..16699
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QFY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29801.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
hypothetical protein
BSR_Lac_UAPBR_inlet_p_1_17316_19
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

16689..17747
DNA (1059bp) protein (353aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Firmicutes bacterium CAG:102 RepID=R5ABS2_9FIRM
BSR_Lac_UAPBR_inlet_p_1_17316_20
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17909..19594
DNA (1686bp) protein (562aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6QE97_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD60646.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
Na/Pi-cotransporter II-like protein
BSR_Lac_UAPBR_inlet_p_1_17316_21
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19752..21095)
DNA (1344bp) protein (448aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
Aspartokinase n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IAM0_9FIRM
aspartate kinase
BSR_Lac_UAPBR_inlet_p_1_17316_22
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21326..22456)
DNA (1131bp) protein (377aa)
Putative carboxy-lyase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX52_OSCVS
putative carboxy-lyase
Putative carboxy-lyase {ECO:0000313|EMBL:BAK98467.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Lac_UAPBR_inlet_p_1_17316_23
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22456..23658)
DNA (1203bp) protein (401aa)
Saccharopine dehydrogenase family protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX51_OSCVS
saccharopine dehydrogenase family protein
Saccharopine dehydrogenase family protein {ECO:0000313|EMBL:BAK98466.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Lac_UAPBR_inlet_p_1_17316_24
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23673..24521)
DNA (849bp) protein (283aa)
sepB; putative agmatinase (EC:3.5.3.11)
Putative agmatinase {ECO:0000313|EMBL:BAK98465.1}; EC=3.5.3.11 {ECO:0000313|EMBL:BAK98465.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Putative agmatinase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX50_OSCVS
BSR_Lac_UAPBR_inlet_p_1_17316_25
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24514..25365)
DNA (852bp) protein (284aa)
speE; spermidine synthase (EC:2.5.1.16)
Spermidine synthase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX49_OSCVS
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Lac_UAPBR_inlet_p_1_17316_26
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25358..26815)
DNA (1458bp) protein (486aa)
speA; arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase {ECO:0000313|EMBL:BAK98463.1}; EC=4.1.1.19 {ECO:0000313|EMBL:BAK98463.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Arginine decarboxylase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX48_OSCVS
BSR_Lac_UAPBR_inlet_p_1_17316_27
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26812..27591)
DNA (780bp) protein (260aa)
speD; S-adenosylmethionine decarboxylase (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KX47_OSCVS
BSR_Lac_UAPBR_inlet_p_1_17316_28
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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28583..29491
DNA (909bp) protein (303aa)
LysR substrate binding domain protein n=2 Tax=Oscillibacter RepID=U2SD83_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:ERK66162.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transcriptional regulator, LysR family
BSR_Lac_UAPBR_inlet_p_1_17316_29
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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29795..30829
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6Q8X4_9FIRM
BSR_Lac_UAPBR_inlet_p_1_17316_30
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(31280..33517)
DNA (2238bp) protein (746aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:505 RepID=R7B8Q7_9CLOT
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDD61314.1}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
signal transduction histidine kinase
Displaying items 1-30 of 83 in total

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