ggKbase home page

BSR_Ace_C_na_89636

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_C_na_89636_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..230
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47436.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
BSR_Ace_C_na_89636_2
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(352..1305)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YBC8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13673.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative small-conductance mechanosensitive channel
BSR_Ace_C_na_89636_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1442..1819)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAZ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47527.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
DtxR family transcriptional regulator
BSR_Ace_C_na_89636_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1932..2963)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46810.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
mreB; rod shape-determining protein MreB
BSR_Ace_C_na_89636_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(3107..3766)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YER1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13671.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
BSR_Ace_C_na_89636_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(3763..3939)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZGY3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13670.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
BSR_Ace_C_na_89636_7
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4263..6344)
DNA (2082bp) protein (694aa)
Methyl-accepting chemotaxis protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4L0F2_OSCVS
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:BAK98980.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Ace_C_na_89636_8
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(6449..7462)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15511.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Predicted oxidoreductases of the aldo/keto reductase family
BSR_Ace_C_na_89636_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists


comp(7940..10582)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XWT4_9FIRM
BSR_Ace_C_na_89636_10
unknown

Not on your lists

comp(10625..11179)
DNA (555bp) protein (185aa)

This feature has no annotations

BSR_Ace_C_na_89636_11
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(11516..12304)
DNA (789bp) protein (263aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEV2_9FIRM
BSR_Ace_C_na_89636_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12338..12997)
DNA (660bp) protein (220aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q4I7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDC16872.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted membrane protein
BSR_Ace_C_na_89636_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13532..14725
DNA (1194bp) protein (398aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB0_9FIRM
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EGJ46806.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
BSR_Ace_C_na_89636_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15609..16811)
DNA (1203bp) protein (401aa)
Elongation factor Tu n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9L7_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tuf; elongation factor Tu
BSR_Ace_C_na_89636_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(16932..19037)
DNA (2106bp) protein (702aa)
Elongation factor G n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YIW1_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
fusA; elongation factor G
BSR_Ace_C_na_89636_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists


comp(19053..19523)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZKF9_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ribosomal protein S7
BSR_Ace_C_na_89636_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19720..20166)
DNA (447bp) protein (149aa)
30S ribosomal protein S12 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M0_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsL; 30S ribosomal protein S12
BSR_Ace_C_na_89636_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20352..20594)
DNA (243bp) protein (81aa)
Ribosomal protein L7ae family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ26_9FIRM
Ribosomal protein L7ae family protein {ECO:0000313|EMBL:EDM98675.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative ribosomal protein L7Ae-like
BSR_Ace_C_na_89636_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20925..21107
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48348.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ferredoxin
BSR_Ace_C_na_89636_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21387..25049)
DNA (3663bp) protein (1221aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDV4_9FIRM
BSR_Ace_C_na_89636_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25071..28820)
DNA (3750bp) protein (1250aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
rpoB; DNA-directed RNA polymerase beta chain (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ29_9FIRM
BSR_Ace_C_na_89636_22
unknown

Not on your lists

comp(28846..29025)
DNA (180bp) protein (60aa)

This feature has no annotations

BSR_Ace_C_na_89636_23
unknown

Not on your lists

comp(29048..29278)
DNA (231bp) protein (77aa)

This feature has no annotations

BSR_Ace_C_na_89636_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29407..29697
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46911.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
BSR_Ace_C_na_89636_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29745..30683
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46912.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Cell wall-associated hydrolases (invasion-associated proteins)
BSR_Ace_C_na_89636_26
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(30741..32165)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13324.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative efflux protein, MATE family
BSR_Ace_C_na_89636_27
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32218..33546)
DNA (1329bp) protein (443aa)
Transporter n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AJE0_9CLOT
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
sodium:neurotransmitter symporter
BSR_Ace_C_na_89636_28
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34090..34419)
DNA (330bp) protein (110aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M3N8_9CLOT
BSR_Ace_C_na_89636_29
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34423..35010)
DNA (588bp) protein (196aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
2-dehydropantoate 2-reductase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M3N8_9CLOT
2-dehydropantoate 2-reductase
BSR_Ace_C_na_89636_30
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35108..35902)
DNA (795bp) protein (265aa)
ferredoxin n=1 Tax=Clostridium beijerinckii RepID=UPI0002E7D12F
nitroreductase
Nitroreductase {ECO:0000313|EMBL:EHJ01689.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Displaying items 1-30 of 100 in total

View Taxonomy