ggKbase home page

BSR_Ace_C_na_148172

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_C_na_148172_1
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2..436
DNA (435bp) protein (145aa)
Alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispira pacifica.;"
Alanine dehydrogenase n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WF51_9SPIO
BSR_Ace_C_na_148172_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

599..940
DNA (342bp) protein (114aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SJZ1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05386.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
BSR_Ace_C_na_148172_3
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

977..2347
DNA (1371bp) protein (457aa)
dipeptidase (EC:3.4.13.-)
Dipeptidase {ECO:0000313|EMBL:BAL00137.1}; EC=3.4.13.- {ECO:0000313|EMBL:BAL00137.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Dipeptidase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSS0_OSCVS
BSR_Ace_C_na_148172_4
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2366..3457
DNA (1092bp) protein (364aa)
isomerase (EC:5.5.1.-)
Isomerase {ECO:0000313|EMBL:BAL00136.1}; EC=5.5.1.- {ECO:0000313|EMBL:BAL00136.1};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Isomerase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KSR9_OSCVS
BSR_Ace_C_na_148172_5
Paenibacillus sp. Aloe-11, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3537..4901)
DNA (1365bp) protein (455aa)
Integral membrane protein n=1 Tax=Paenibacillus sp. Aloe-11 RepID=H6CPM2_9BACL
Integral membrane protein {ECO:0000313|EMBL:EHS55532.1}; TaxID=1050222 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. Aloe-11.;"
matE2; multi antimicrobial extrusion protein MatE2
BSR_Ace_C_na_148172_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5066..6370)
DNA (1305bp) protein (435aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJN3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05286.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Na+/H+ antiporter family protein
BSR_Ace_C_na_148172_7
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(6620..7183)
DNA (564bp) protein (188aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PSX2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL70341.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
hypothetical protein
BSR_Ace_C_na_148172_8
unknown

Not on your lists

comp(7183..7647)
DNA (465bp) protein (155aa)

This feature has no annotations

BSR_Ace_C_na_148172_9
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

7922..8377
DNA (456bp) protein (152aa)
Transcriptional regulator, AsnC family n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NP73_GRAMM
transcriptional regulator, AsnC family
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:AEU38272.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
BSR_Ace_C_na_148172_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8478..9266)
DNA (789bp) protein (263aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33968.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
zinc/iron permease
BSR_Ace_C_na_148172_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9277..10110)
DNA (834bp) protein (278aa)
rrmA; ribosomal RNA large subunit methyltransferase A (EC:2.1.1.51)
23S rRNA (Guanine745-N1)-methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCA5_9FIRM
23S rRNA (Guanine745-N1)-methyltransferase {ECO:0000313|EMBL:EGJ48139.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
BSR_Ace_C_na_148172_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10357..11607)
DNA (1251bp) protein (417aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
glyA; Serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCA2_9FIRM
BSR_Ace_C_na_148172_13
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

11857..12519
DNA (663bp) protein (221aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAP6_9FIRM
BSR_Ace_C_na_148172_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12516..13157
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48134.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
BSR_Ace_C_na_148172_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13258..14172
DNA (915bp) protein (305aa)
Uncharacterized isomerase CA_C3446 {ECO:0000313|EMBL:CCK90682.1}; EC=5.1.-.- {ECO:0000313|EMBL:CCK90682.1};; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
Phenazine biosynthesis protein, PhzF family n=13 Tax=Clostridium difficile RepID=D5Q405_CLODI
putative phenazine biosynthesis PhzC/PhzF family protein
BSR_Ace_C_na_148172_16
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

14233..15495
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13359.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
BSR_Ace_C_na_148172_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

15533..17851
DNA (2319bp) protein (773aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13345.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
BSR_Ace_C_na_148172_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17902..18936
DNA (1035bp) protein (345aa)
holA; DNA polymerase III delta subunit (EC:2.7.7.7)
DNA polymerase III, delta subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9D2_9FIRM
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EGJ48179.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
BSR_Ace_C_na_148172_19
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

18954..19550
DNA (597bp) protein (199aa)
Ribonuclease M5 n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAB2_9FIRM
Ribonuclease M5 {ECO:0000313|EMBL:ESL13343.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
BSR_Ace_C_na_148172_20
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19617..20852)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=3 Tax=Oscillibacter RepID=U2QG03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK61911.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
BSR_Ace_C_na_148172_21
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(20864..22147)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YDS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13341.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
BSR_Ace_C_na_148172_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22185..23351)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STP8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94657.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
BSR_Ace_C_na_148172_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23348..23659)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZFZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13340.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
PadR family transcriptional regulator
BSR_Ace_C_na_148172_24
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

23953..24849
DNA (897bp) protein (299aa)
Sporulation sigma-E factor-processing peptidase {ECO:0000256|PIRNR:PIRNR018571}; EC=3.4.23.- {ECO:0000256|PIRNR:PIRNR018571};; Membrane-associated aspartic protease {ECO:0000256|PIRNR:PIRNR018571}; Stage II sporulation protein GA {ECO:0000256|PIRNR:PIRNR018571}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Sigma-E processing peptidase SpoIIGA n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUI8_9FIRM
putative peptidase
BSR_Ace_C_na_148172_25
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

24846..25568
DNA (723bp) protein (241aa)
RNA polymerase sigma-E factor n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAA8_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
sigE; RNA polymerase sigma-E factor precursor
BSR_Ace_C_na_148172_26
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(25822..26406)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XUB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL13264.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
BSR_Ace_C_na_148172_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26563..27234
DNA (672bp) protein (224aa)
Redox-sensing transcriptional repressor Rex n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9E2_9FIRM
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rex; redox-sensing transcriptional repressor Rex
BSR_Ace_C_na_148172_28
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

27231..28340
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YAU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12707.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
cell wall/surface repeat-containing protein
BSR_Ace_C_na_148172_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

28433..28609
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY25947.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
keratin associated protein 6-2-like protein
BSR_Ace_C_na_148172_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29007..30317
DNA (1311bp) protein (437aa)
Electron transport complex protein RnfC n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCE1_9FIRM
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
electron transport complex, RnfABCDGE type, C subunit
Displaying items 1-30 of 46 in total

View Taxonomy