ggKbase home page

BSR_Ace_C_na_96535

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_C_na_96535_1
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
Putative permease n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XXC0_9FIRM
Putative permease {ECO:0000313|EMBL:EHQ91126.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
permease
BSR_Ace_C_na_96535_2
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(227..1246)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KYL6_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK98660.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
BSR_Ace_C_na_96535_3
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1313..1789)
DNA (477bp) protein (159aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q251Z7_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE81895.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
BSR_Ace_C_na_96535_4
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2310..2918
DNA (609bp) protein (203aa)
Regulatory protein TetR n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUN4_SYNGF
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:ADY55527.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
BSR_Ace_C_na_96535_5
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2948..3619
DNA (672bp) protein (224aa)
Conserved hypothetical CHP02185, integral membrane protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUN3_SYNGF
hypothetical protein
Conserved hypothetical CHP02185, integral membrane protein {ECO:0000313|EMBL:ADY55526.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
BSR_Ace_C_na_96535_6
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3619..4356
DNA (738bp) protein (246aa)
ABC-type cobalt transport system permease component CbiQ and related transporters n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EM61_9FIRM
ABC-type cobalt transport system, permease component CbiQ and related transporters
Tax=BJP_IG2069_Clostridiales_48_15
BSR_Ace_C_na_96535_7
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4368..5843
DNA (1476bp) protein (492aa)
ABC transporter related protein n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0SUN2_SYNGF
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADY55525.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
BSR_Ace_C_na_96535_8
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5840..7657
DNA (1818bp) protein (606aa)
ABC transporter, ATP-binding protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XI80_DESHA
hypothetical protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHL08563.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
BSR_Ace_C_na_96535_9
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7650..9398
DNA (1749bp) protein (583aa)
ABC transporter n=1 Tax=Desulfitobacterium hafniense RepID=UPI000382587E
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:CDX03662.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobacterium frappieri).;"
ABC transporter
BSR_Ace_C_na_96535_10
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9735..10412)
DNA (678bp) protein (226aa)
Alkyl hydroperoxide reductase subunit C {ECO:0000313|EMBL:KJJ68618.1}; EC=1.11.1.15 {ECO:0000313|EMBL:KJJ68618.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
C-terminal domain of 1-Cys peroxiredoxin n=1 Tax=Clostridium sp. MSTE9 RepID=J1H6E0_9CLOT
Alkyl hydroperoxide reductase subunit C-like protein
BSR_Ace_C_na_96535_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10970..11596
DNA (627bp) protein (209aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6Q6_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EJF40117.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
TetR family transcriptional regulator
BSR_Ace_C_na_96535_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11744..13495
DNA (1752bp) protein (584aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H406_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF40245.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC-type multidrug transport system, ATPase and permease components
BSR_Ace_C_na_96535_13
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13492..15240
DNA (1749bp) protein (583aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WTY4_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF39831.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
ABC-type multidrug transport system, ATPase and permease components
BSR_Ace_C_na_96535_14
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15243..16628
DNA (1386bp) protein (462aa)
multidrug transporter MatE n=1 Tax=Desulfitobacterium hafniense RepID=UPI00037E2FE1
hypothetical protein
MATE efflux family protein {ECO:0000313|EMBL:EHL08267.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP7.;"
BSR_Ace_C_na_96535_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17203..17463
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CY91_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG55946.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
BSR_Ace_C_na_96535_16
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17582..19351
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7A7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66929.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
recombinase
BSR_Ace_C_na_96535_17
unknown

Not on your lists

comp(19320..19649)
DNA (330bp) protein (110aa)

This feature has no annotations

BSR_Ace_C_na_96535_18
unknown

Not on your lists

comp(20205..20849)
DNA (645bp) protein (215aa)

This feature has no annotations

BSR_Ace_C_na_96535_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21013..21252)
DNA (240bp) protein (80aa)
XRE family transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036DFCB6
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EJF41977.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
BSR_Ace_C_na_96535_20
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21405..21698
DNA (294bp) protein (98aa)
AbrB family transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035EBB82
Uncharacterized protein {ECO:0000313|EMBL:EJF41786.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
abrB; transition state regulatory protein AbrB
BSR_Ace_C_na_96535_21
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(21940..23043)
DNA (1104bp) protein (368aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5GWE4_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CCY21508.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
diguanylate cyclase (GGDEF) domain
BSR_Ace_C_na_96535_trna_1
unknown

Not on your lists

comp(23266..23339)
DNA (74bp)
transferRNA Pro
BSR_Ace_C_na_96535_22
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(23556..24911)
DNA (1356bp) protein (452aa)
RNA polymerase sigma-54 factor n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YFN3_9FIRM
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ESL15128.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
RNA polymerase sigma-54 factor
BSR_Ace_C_na_96535_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25052..26284)
DNA (1233bp) protein (411aa)
Hydrogenase subunit (Ferredoxin) n=1 Tax=Clostridium sp. D5 RepID=F0Z3H4_9CLOT
Hydrogenase subunit (Ferredoxin) {ECO:0000313|EMBL:EGB91238.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hydrogenase large subunit domain-containing protein
BSR_Ace_C_na_96535_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26539..27354)
DNA (816bp) protein (272aa)
Formate/nitrite transporter n=4 Tax=Clostridium RepID=E7GR73_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05951.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Formate/nitrite family of transporters
BSR_Ace_C_na_96535_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27410..28636)
DNA (1227bp) protein (409aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00372}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hutI; imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK8_9FIRM
BSR_Ace_C_na_96535_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28704..30719)
DNA (2016bp) protein (672aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hutU; urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEK7_9FIRM
BSR_Ace_C_na_96535_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30953..31612)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48184.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
BSR_Ace_C_na_96535_28
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31682..33247)
DNA (1566bp) protein (522aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW21_9FIRM
phosphoenolpyruvate carboxykinase
BSR_Ace_C_na_96535_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(33431..34291)
DNA (861bp) protein (287aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ksgA; dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9D5_9FIRM
Displaying items 1-30 of 57 in total

View Taxonomy