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BSR_Ace_LFCR_na_at_142423

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_LFCR_na_at_142423_1
Enterococcus moraviensis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(52..570)
-----------------
DNA (519bp)
protein (173aa)
Transcriptional regulator n=1 Tax=Enterococcus moraviensis ATCC BAA-383 RepID=R2U2U7_9ENTE
transcriptional repressor for NAD biosynthesis
Transcriptional regulator {ECO:0000313|EMBL:EOI07022.1}; TaxID=1158609 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus moraviensis ATCC BAA-383.;"
BSR_Ace_LFCR_na_at_142423_2
Carnobacterium sp. WN1359, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(567..1136)
-----------------
DNA (570bp)
protein (190aa)
Membrane protein n=1 Tax=Carnobacterium sp. WN1359 RepID=U5S9J9_9LACT
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:AGY81706.1}; TaxID=1266845 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. WN1359.;"
BSR_Ace_LFCR_na_at_142423_3
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1279..1821
-----------------
DNA (543bp)
protein (181aa)
Rubrerythrin n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A680_9CLOT
Rubrerythrin {ECO:0000313|EMBL:CCX38408.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
rubrerythrin
BSR_Ace_LFCR_na_at_142423_4
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1955..2242
-----------------
DNA (288bp)
protein (96aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AES0_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
rpsF; 30S ribosomal protein S6
BSR_Ace_LFCR_na_at_142423_5
Coprobacillus sp. CAG:605, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2272..2727
-----------------
DNA (456bp)
protein (152aa)
Single-stranded DNA-binding protein n=1 Tax=Coprobacillus sp. CAG:605 RepID=R5VMD3_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262855 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:605.;"
ssb_2; helix-destabilizing protein
BSR_Ace_LFCR_na_at_142423_6
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2750..2992
-----------------
DNA (243bp)
protein (81aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:1024 RepID=R5ADC0_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
rpsR; 30S ribosomal protein S18
BSR_Ace_LFCR_na_at_142423_7
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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3127..4347
-----------------
DNA (1221bp)
protein (407aa)
Mannitol-1-phosphate/altronate dehydrogenases n=4 Tax=Clostridiales RepID=D4MYB7_9FIRM
Mannitol-1-phosphate/altronate dehydrogenases
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:CDA31839.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
BSR_Ace_LFCR_na_at_142423_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4497..5726
-----------------
DNA (1230bp)
protein (410aa)
Mannitol dehydrogenase domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D448_9CLOT
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EEG53859.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Mannitol-1-phosphate/altronate dehydrogenases
BSR_Ace_LFCR_na_at_142423_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5847..7118
-----------------
DNA (1272bp)
protein (424aa)
Mannitol dehydrogenase domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D448_9CLOT
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EEG53859.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Mannitol-1-phosphate/altronate dehydrogenases
BSR_Ace_LFCR_na_at_142423_10
Anaerostipes sp. 3_2_56FAA, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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7134..8393
-----------------
DNA (1260bp)
protein (420aa)
Mannitol dehydrogenase domain protein n=3 Tax=Anaerostipes RepID=B0MIH5_9FIRM
Mannitol dehydrogenase Rossmann domain-containing protein {ECO:0000313|EMBL:EFV23500.1}; TaxID=665937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes sp. 3_2_56FAA.;"
Mannitol-1-phosphate/altronate dehydrogenases
BSR_Ace_LFCR_na_at_142423_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8415..9659
-----------------
DNA (1245bp)
protein (415aa)
Mannitol dehydrogenase domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D448_9CLOT
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:EEG53859.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Mannitol-1-phosphate/altronate dehydrogenases
BSR_Ace_LFCR_na_at_142423_12
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9962..11281
-----------------
DNA (1320bp)
protein (440aa)
tRNA synthetase class II (D K and N) n=1 Tax=Blautia sp. CAG:37 RepID=R7JXA6_9FIRM
tRNA synthetase class II (D K and N) {ECO:0000313|EMBL:CDE67442.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
tRNA synthetase class II (D K and N)
BSR_Ace_LFCR_na_at_142423_13
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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11304..11690
-----------------
DNA (387bp)
protein (129aa)
CMP/dCMP deaminase zinc-binding protein n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZZQ5_MAHA5
CMP/dCMP deaminase zinc-binding protein
CMP/dCMP deaminase zinc-binding protein {ECO:0000313|EMBL:AEE97902.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
BSR_Ace_LFCR_na_at_142423_14
Erysipelotrichaceae bacterium 5_2_54FAA, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11836..12360)
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 5_2_54FAA RepID=U5F752_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFE46381.2}; TaxID=552396 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 5_2_54FAA.;"
acetyltransferase
BSR_Ace_LFCR_na_at_142423_15
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12375..13190)
-----------------
DNA (816bp)
protein (272aa)
ATPases involved in chromosome partitioning n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LDD4_RUMC1
ATPases involved in chromosome partitioning
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CBL17629.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
BSR_Ace_LFCR_na_at_142423_16
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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13329..13778
-----------------
DNA (450bp)
protein (150aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RNW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39415.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
MarR family transcriptional regulator
BSR_Ace_LFCR_na_at_142423_17
unknown

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13993..14694
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

BSR_Ace_LFCR_na_at_142423_18
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14745..15782
-----------------
DNA (1038bp)
protein (346aa)
Threonine aldolase (EC:4.1.2.5)
Threonine aldolase {ECO:0000313|EMBL:AGY74915.1}; EC=4.1.2.5 {ECO:0000313|EMBL:AGY74915.1};; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
Threonine aldolase n=1 Tax=Clostridium autoethanogenum DSM 10061 RepID=U5RQB7_9CLOT
BSR_Ace_LFCR_na_at_142423_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15904..17244
-----------------
DNA (1341bp)
protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium ultunense Esp RepID=M1ZHN7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCQ98039.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
hypothetical protein
BSR_Ace_LFCR_na_at_142423_20
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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17282..17716
-----------------
DNA (435bp)
protein (145aa)
Putative uncharacterized protein id=3717086 bin=GWF2_Clostridiales_38_85 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
pyridoxamine 5-phosphate oxidase
Tax=GWF2_Clostridiales_38_85_curated
BSR_Ace_LFCR_na_at_142423_21
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17797..18177)
-----------------
DNA (381bp)
protein (127aa)
Endoribonuclease L-PSP n=3 Tax=Lachnospiraceae RepID=F3ABY4_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:CDC07877.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
endoribonuclease L-PSP, putative
BSR_Ace_LFCR_na_at_142423_22
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18235..19215)
-----------------
DNA (981bp)
protein (327aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AGH0_9CLOT
helix-turn-helix domain-containing protein
Tax=BJP_IG2157_Clostridiales_52_13
BSR_Ace_LFCR_na_at_142423_23
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19385..20572)
-----------------
DNA (1188bp)
protein (396aa)
Transporter, major facilitator family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXQ4_9CLOT
Transporter, major facilitator family protein {ECO:0000313|EMBL:EEG75361.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
sugar phosphate permease
BSR_Ace_LFCR_na_at_142423_trna_1
unknown

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20739..20812
-----------------
DNA (74bp)
transferRNA Arg
BSR_Ace_LFCR_na_at_142423_24

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21632..21787
-----------------
DNA (156bp)
protein (52aa)
Uncharacterized protein n=2 Tax=human gut metagenome RepID=K1TF69_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC60558.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
BSR_Ace_LFCR_na_at_142423_25
unknown

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21920..21982
-----------------
DNA (63bp)
protein (21aa)

This feature has no annotations

Displaying 26 items

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