ggKbase home page

BSR_Ace_UAPBR_effluent_at_21429

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_at_21429_1
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(648..1316)
DNA (669bp) protein (223aa)
rluA; Ribosomal large subunit pseudouridine synthase A (EC:5.4.99.28)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
ribosomal large subunit pseudouridine synthase A n=1 Tax=Pseudomonas thermotolerans RepID=UPI00036118D9
BSR_Ace_UAPBR_effluent_at_21429_2
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1303..3891)
DNA (2589bp) protein (863aa)
(Protein-PII) uridylyltransferase (EC:2.7.7.59)
PII uridylyl-transferase n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI000376E3E4
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
BSR_Ace_UAPBR_effluent_at_21429_3
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3898..4665)
DNA (768bp) protein (256aa)
Methionine aminopeptidase n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVW0_NITHN
methionine aminopeptidase, type I
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
BSR_Ace_UAPBR_effluent_at_21429_4
unknown

Not on your lists

4819..5145
DNA (327bp) protein (109aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_21429_trna_1
unknown

Not on your lists

5182..5268
DNA (87bp)
transferRNA Ser
BSR_Ace_UAPBR_effluent_at_21429_5
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5451..7235
DNA (1785bp) protein (595aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
ATP-dependent RNA helicase DeaD n=1 Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PHH9_CELJU
deaD-1; ATP-dependent RNA helicase DeaD
BSR_Ace_UAPBR_effluent_at_21429_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7700..10582
DNA (2883bp) protein (961aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZH3_HALNC
BSR_Ace_UAPBR_effluent_at_21429_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10651..11850
DNA (1200bp) protein (400aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZH2_HALNC
BSR_Ace_UAPBR_effluent_at_21429_8
Shewanella loihica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12089..12412
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Shewanella loihica (strain ATCC BAA-1088 / PV-4) RepID=A3QG71_SHELP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO24469.1}; TaxID=323850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella loihica (strain ATCC BAA-1088 / PV-4).;"
BSR_Ace_UAPBR_effluent_at_21429_trna_2
unknown

Not on your lists

comp(12664..12738)
DNA (75bp)
transferRNA Pseudo
BSR_Ace_UAPBR_effluent_at_21429_9
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12981..14417
DNA (1437bp) protein (479aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QKG4_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW91514.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
BSR_Ace_UAPBR_effluent_at_21429_10
unknown

Not on your lists

14414..14887
DNA (474bp) protein (158aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_21429_11
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15036..15239
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE31 RepID=UPI000375AB43
Uncharacterized protein {ECO:0000313|EMBL:ENO79691.1}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
putative flavin-containing monooxygenase FMO:FAD-dependent pyridine nucleotide-disulfide oxidoreductase
BSR_Ace_UAPBR_effluent_at_21429_12
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15236..17179
DNA (1944bp) protein (648aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00037A3B8E
Uncharacterized protein {ECO:0000313|EMBL:EHJ47079.1}; TaxID=644968 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_21429_13
unknown

Not on your lists

17486..17758
DNA (273bp) protein (91aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_21429_14
unknown

Not on your lists

17755..17994
DNA (240bp) protein (80aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_21429_15
unknown

Not on your lists

18006..18086
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 17 items

View Taxonomy