ggKbase home page

BSR_Ace_UAPBR_effluent_at_23101

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_at_23101_1
unknown

Not on your lists

1..159
DNA (159bp) protein (53aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_23101_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(204..818)
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003668773
Maf-like protein Thini_4462 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
MAF protein
BSR_Ace_UAPBR_effluent_at_23101_3
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

863..1360
DNA (498bp) protein (166aa)
metal-binding protein n=1 Tax=Methylobacter marinus RepID=UPI00036ACF2F
Uncharacterized protein {ECO:0000313|EMBL:AKH19619.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_23101_4
Halorhodospira halochloris, Halorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1384..1572
DNA (189bp) protein (63aa)
50S ribosomal protein L32 n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WXU9_9ALTE
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1354791 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Halorhodospira.;" source="Halorhodospira halochloris str. A.;"
BSR_Ace_UAPBR_effluent_at_23101_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1668..2690
DNA (1023bp) protein (341aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phosphate acyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q7_HALNC
fatty acid/phospholipid synthesis protein PlsX
BSR_Ace_UAPBR_effluent_at_23101_6

Not on your lists

2687..3655
DNA (969bp) protein (323aa)
3-oxoacyl-ACP synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CX22_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKN51823.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BSR_Ace_UAPBR_effluent_at_23101_7
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3661..4137
DNA (477bp) protein (159aa)
Adenylate cyclase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A913_ALKEH
adenylate cyclase
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
BSR_Ace_UAPBR_effluent_at_23101_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4153..4818
DNA (666bp) protein (222aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L1Q4_HALNC
LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACX96627.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
BSR_Ace_UAPBR_effluent_at_23101_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4842..6701
DNA (1860bp) protein (620aa)
UvrABC system protein C n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSX3_THISH
excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
BSR_Ace_UAPBR_effluent_at_23101_10
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6801..7358
DNA (558bp) protein (186aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ACL72987.1}; EC=2.7.8.5 {ECO:0000313|EMBL:ACL72987.1};; Flags: Precursor;; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000375AB3B
BSR_Ace_UAPBR_effluent_at_23101_11
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7442..7903)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI000363C3FC
MerR family transcriptional regulator {ECO:0000313|EMBL:ESH90736.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
merR family transcriptional regulator
BSR_Ace_UAPBR_effluent_at_23101_12
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7881..8183)
DNA (303bp) protein (101aa)
Integration host factor subunit alpha n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GXQ3_9GAMM
integration host factor subunit alpha
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
BSR_Ace_UAPBR_effluent_at_23101_13
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8186..10564)
DNA (2379bp) protein (793aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source="Ectothiorhodospira sp. PHS-1.;"
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G1S8_9GAMM
BSR_Ace_UAPBR_effluent_at_23101_14
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(10578..11576)
DNA (999bp) protein (333aa)
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit id=2036119 bin=GWE2_Gallionellales_58_10 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small
Tax=GWE2_Gallionellales_58_10_curated
BSR_Ace_UAPBR_effluent_at_23101_15
Acinetobacter nectaris, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11729..12088)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Acinetobacter nectaris CIP 110549 RepID=V2TRD0_9GAMM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1392540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter nectaris CIP 110549.;"
ribosomal protein L20
BSR_Ace_UAPBR_effluent_at_23101_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12110..12304)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D0_HALNC
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
BSR_Ace_UAPBR_effluent_at_23101_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12483..12869)
DNA (387bp) protein (129aa)
Translation initiation factor IF-3 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D1_HALNC
translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
BSR_Ace_UAPBR_effluent_at_23101_18
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13045..14952)
DNA (1908bp) protein (636aa)
Threonine--tRNA ligase n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A2F7_METMM
threonyl-tRNA synthetase
Tax=BJP_IG2158_Methylococcales_50_91
BSR_Ace_UAPBR_effluent_at_23101_trna_1
unknown

Not on your lists

comp(15052..15123)
DNA (72bp)
transferRNA Val
BSR_Ace_UAPBR_effluent_at_23101_19
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15378..15746
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI000364A1A0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCG07363.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
BSR_Ace_UAPBR_effluent_at_23101_20
Marinobacterium sp. AK27, Marinobacterium, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15983..17485
DNA (1503bp) protein (501aa)
Nitrogenase iron-molybdenum cofactor biosynthesis protein NifE n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2X4_AZOSB
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE {ECO:0000313|EMBL:KEA62593.1}; TaxID=1232683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacterium.;" source="Marinobacterium sp. AK27.;"
nifE; nitrogenase iron-molybdenum cofactor biosynthesis protein NifE
BSR_Ace_UAPBR_effluent_at_23101_21
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17501..18901
DNA (1401bp) protein (467aa)
nitrogenase molybdenum-iron cofactor biosynthesis protein NifN (EC:1.18.6.1)
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifN n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPX8_SIDLE
Tax=GWF2_Sideroxydans_59_14_curated
BSR_Ace_UAPBR_effluent_at_23101_22
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18876..19340
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CDK9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ41702.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_23101_23
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19337..19837
DNA (501bp) protein (167aa)
Hypothetical sigma-E factor regulatory protein n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2X1_AZOSB
Positive regulator for alginate biosynthesis MucC {ECO:0000313|EMBL:CEA01072.1}; TaxID=1461581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 12M76_air.;"
sigma-E factor regulatory protein
BSR_Ace_UAPBR_effluent_at_23101_24
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19834..20295
DNA (462bp) protein (154aa)
Nitrogen fixation protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CPY1_SIDLE
Uncharacterized protein {ECO:0000313|EMBL:GAO34541.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
nitrogen fixation protein
BSR_Ace_UAPBR_effluent_at_23101_25
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20309..20521
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FX3_DECAR
hypothetical protein
Tax=BJP_08E140C01_Dechloromonas_61_78
BSR_Ace_UAPBR_effluent_at_23101_26
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20523..20813
DNA (291bp) protein (97aa)
Probable ferredoxin n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1K2W8_AZOSB
Ferredoxin-3 {ECO:0000313|EMBL:GAO34543.1}; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
fdxB; ferredoxin
BSR_Ace_UAPBR_effluent_at_23101_27
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20810..21259
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47FX0_DECAR
hypothetical protein
Tax=BJP_IG2103_Dechloromonas_63_51
BSR_Ace_UAPBR_effluent_at_23101_28
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21349..22410
DNA (1062bp) protein (354aa)
ApbE family lipoprotein n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GP59_THISH
putative thiamine biosynthesis lipoprotein ApbE
Putative thiamine biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:CCQ72919.1}; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
BSR_Ace_UAPBR_effluent_at_23101_29
Lysobacter defluvii, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22583..22945
DNA (363bp) protein (121aa)
Rod shape-determining-related protein n=1 Tax=Pseudoalteromonas rubra ATCC 29570 RepID=U1LTX8_9GAMM
Rod shape-determining protein MreB {ECO:0000313|EMBL:KGO97910.1}; TaxID=1385515 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter defluvii IMMIB APB-9 = DSM 18482.;"
rod shape-determining-like protein
Displaying items 1-30 of 33 in total

View Taxonomy