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BSR_Ace_UAPBR_effluent_at_6050

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_at_6050_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..2828)
DNA (2826bp) protein (942aa)
Cellobiose phosphorylase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y725_THIV6
Carbohydrate binding protein {ECO:0000313|EMBL:CDI01234.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
cellobiose phosphorylase
BSR_Ace_UAPBR_effluent_at_6050_2
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2937..6194)
DNA (3258bp) protein (1086aa)
Putative uncharacterized protein n=1 Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UTW7_PSEUP id=5223539 bin=16ft_combo_ws3_JS1 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Putative Discoidin domain protein {ECO:0000313|EMBL:CDI02210.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
discoidin domain-containing protein
BSR_Ace_UAPBR_effluent_at_6050_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6191..7012)
DNA (822bp) protein (274aa)
ABC transporter, permease family protein {ECO:0000313|EMBL:CDH46928.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
ABC-type sugar transport system permease subunit id=4594117 bin=GWC2_Ignavibacteria_56_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
sugar ABC transporter permease
BSR_Ace_UAPBR_effluent_at_6050_4
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7009..7941)
DNA (933bp) protein (311aa)
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:CDH47427.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
ABC-type sugar transport system permease subunit id=4594115 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
ABC-type sugar transport system permease subunit
BSR_Ace_UAPBR_effluent_at_6050_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7938..9221)
DNA (1284bp) protein (428aa)
Putative sugar ABC transporter, sugar-binding protein {ECO:0000313|EMBL:CDH47426.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Sugar ABC transporter, periplasmic sugar-binding protein USSDB1B; K10188 lactose/L-arabinose transport system substrate-binding protein id=24457719 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
family 1 extracellular solute-binding protein
BSR_Ace_UAPBR_effluent_at_6050_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9247..11670)
DNA (2424bp) protein (808aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
DNA gyrase subunit beta (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVU3_HALNC
BSR_Ace_UAPBR_effluent_at_6050_7
Azotobacter chroococcum, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11706..12773)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000378E833
recF; DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1328314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter chroococcum NCIMB 8003.;"
BSR_Ace_UAPBR_effluent_at_6050_8
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12781..13890)
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2L0A6_9GAMM
BSR_Ace_UAPBR_effluent_at_6050_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14181..15557)
DNA (1377bp) protein (459aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GSS1_THISH
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sulfidiphilus (strain HL-EbGR7).;"
BSR_Ace_UAPBR_effluent_at_6050_10
unknown

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comp(15969..16514)
DNA (546bp) protein (182aa)

This feature has no annotations

BSR_Ace_UAPBR_effluent_at_6050_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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16680..18341
DNA (1662bp) protein (554aa)
Membrane protein insertase YidC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXN2_HALNC
YidC/Oxa1 family membrane protein insertase domain containing
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
BSR_Ace_UAPBR_effluent_at_6050_12
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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18352..19704
DNA (1353bp) protein (451aa)
mnmE; tRNA modification GTPase MnmE (EC:3.6.-.-)
tRNA modification GTPase MnmE n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AQA5_PSERE
Tax=BJP_IG2102_Gammaproteobacteria_62_140
BSR_Ace_UAPBR_effluent_at_6050_13
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19770..20813
DNA (1044bp) protein (348aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=644 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila.;"
Selenide, water dikinase n=1 Tax=Aeromonas veronii AER39 RepID=K1J285_9GAMM
selenophosphate synthetase
BSR_Ace_UAPBR_effluent_at_6050_14
Sulfurimonas sp. AST-10, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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comp(20984..21637)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI00036F58E3
Uncharacterized protein {ECO:0000313|EMBL:EQB40175.1}; TaxID=1172190 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas sp. AST-10.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_6050_15
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21792..22901
DNA (1110bp) protein (370aa)
tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035454}; EC=2.9.1.- {ECO:0000256|HAMAP-Rule:MF_01622, ECO:0000256|SAAS:SAAS00035457};; Selenophosphate-dependent tRNA 2-selenouridine synthase {ECO:0000256|HAMAP-Rule:MF_01622}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
selU; tRNA 2-selenouridine synthase (EC:2.9.1.1)
tRNA 2-selenouridine synthase n=1 Tax=Cupriavidus sp. HPC(L) RepID=V2J7L1_9BURK
BSR_Ace_UAPBR_effluent_at_6050_16
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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22898..23629
DNA (732bp) protein (244aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01589};; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19751.;"
tRNA (cmo5U34)-methyltransferase n=1 Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=CMOA_GEOLS
methyltransferase
BSR_Ace_UAPBR_effluent_at_6050_17
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23775..26858)
DNA (3084bp) protein (1028aa)
Putative multidrug efflux transporter AcrB transmembrane domain n=1 Tax=Ralstonia solanacearum CFBP2957 RepID=D8NIG6_RALSL
putative multidrug efflux transporter AcrB transmembrane domain
Putative multidrug efflux transporter AcrB transmembrane domain {ECO:0000313|EMBL:CBJ42838.1}; TaxID=859656 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CFBP2957.;"
BSR_Ace_UAPBR_effluent_at_6050_18
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(26862..27962)
DNA (1101bp) protein (367aa)
Rnd efflux pump, membrane fusion protein, czcb subfamily n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G1B6_RALS8
agrB; rnd efflux pump, membrane fusion protein, czcb subfamily
Rnd efflux pump, membrane fusion protein, czcb subfamily {ECO:0000313|EMBL:AEG68920.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
BSR_Ace_UAPBR_effluent_at_6050_19
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(27955..29466)
DNA (1512bp) protein (504aa)
Outer membrane chanel lipoprotein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G1B7_RALS8
oprM; outer membrane chanel lipoprotein
Outer membrane chanel lipoprotein {ECO:0000313|EMBL:AEG68921.1}; TaxID=1031711 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (strain Po82).;"
BSR_Ace_UAPBR_effluent_at_6050_20
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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29571..30272
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Ralstonia solanacearum RepID=UPI00018166FF
putative transcription regulator protein, TetR family
TetR family transcriptional regulator {ECO:0000313|EMBL:KFX27036.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
BSR_Ace_UAPBR_effluent_at_6050_21
Agarivorans albus, Agarivorans, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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30457..31452
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Agarivorans albus MKT 106 RepID=R9PIP2_AGAAL
Uncharacterized protein {ECO:0000313|EMBL:GAD01212.1}; TaxID=1331007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Agarivorans.;" source="Agarivorans albus MKT 106.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_at_6050_22
Edwardsiella tarda, Edwardsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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31452..32438
DNA (987bp) protein (329aa)
tRNA (mo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194472}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194476};; TaxID=498217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella.;" source="Edwardsiella tarda (strain EIB202).;"
tRNA (mo5U34)-methyltransferase n=3 Tax=Edwardsiella tarda RepID=D0ZGZ5_EDWTE
tRNA (5-methoxyuridine) 34 synthase
BSR_Ace_UAPBR_effluent_at_6050_23
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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32461..33204
DNA (744bp) protein (248aa)
Short chain dehydrogenase n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HVU0_PSEUO
Dihydromonapterin reductase {ECO:0000313|EMBL:ETM67562.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
dihydrofolate reductase
Displaying 23 items

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