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BSR_Ace_LFCR_na_p_83477

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_LFCR_na_p_83477_1
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

1..642
DNA (642bp) protein (214aa)
RNA polymerase sigma factor id=4288983 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rpoD; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
Tax=GWF2_Lentisphaerae_52_8_curated
BSR_Ace_LFCR_na_p_83477_2
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

684..851
DNA (168bp) protein (56aa)
30S ribosomal protein S21 id=4288984 bin=GWF2_Lentisphaerae_52_8 species=unknown genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
rpsU; ribosomal protein S21
Tax=GWF2_Lentisphaerae_44_16_curated
BSR_Ace_LFCR_na_p_83477_3
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(1319..2683)
DNA (1365bp) protein (455aa)
4-aminobutyrate aminotransferase id=2138906 bin=GWE2_Bacteroidetes_41_25 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
acetylornithine transaminase
Tax=GWF2_Lentisphaerae_45_14_curated
BSR_Ace_LFCR_na_p_83477_4
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2700..3965)
DNA (1266bp) protein (422aa)
Oxidoreductase domain-containing protein id=4299062 bin=GWF2_Bacteroidetes_42_66 species=Clostridium bolteae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
hypothetical protein
Tax=GWF2_Lentisphaerae_45_14_curated
BSR_Ace_LFCR_na_p_83477_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(4066..4611)
DNA (546bp) protein (182aa)
D,D-heptose 1,7-bisphosphate phosphatase id=4540947 bin=GWF2_Lentisphaerae_52_8 species=Thermovirga lienii genus=Thermovirga taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
D,D-heptose 1,7-bisphosphate phosphatase
Tax=GWF2_Lentisphaerae_52_8_curated
BSR_Ace_LFCR_na_p_83477_6
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

comp(4613..5677)
DNA (1065bp) protein (355aa)
Geranylgeranyl pyrophosphate synthetase id=4286603 bin=GWF2_Lentisphaerae_49_21 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
bifunctional short chain isoprenyl diphosphate synthase
Tax=GWF2_Lentisphaerae_49_21_curated
BSR_Ace_LFCR_na_p_83477_7
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5674..7344)
DNA (1671bp) protein (557aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase id=3268130 bin=GWF2_Lentisphaerae_50_93 species=Akkermansia muciniphila genus=Akkermansia taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_45_14_curated
BSR_Ace_LFCR_na_p_83477_8
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(7355..8461)
DNA (1107bp) protein (369aa)
Twitching motility protein id=4261352 bin=GWF2_Lentisphaerae_52_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
twitching mobility protein
Tax=GWF2_Lentisphaerae_52_8_curated
BSR_Ace_LFCR_na_p_83477_9
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(8486..9205)
DNA (720bp) protein (240aa)
Pyridoxine 5'-phosphate synthase id=4238498 bin=GWF2_Lentisphaerae_49_21 species=unknown genus=Alteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
pdxJ; pyridoxine 5'-phosphate synthase
Tax=GWF2_Lentisphaerae_45_14_curated
BSR_Ace_LFCR_na_p_83477_10
unknown

Not on your lists

comp(9199..10011)
DNA (813bp) protein (271aa)

This feature has no annotations

BSR_Ace_LFCR_na_p_83477_11
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10011..10646)
DNA (636bp) protein (212aa)
Riboflavin synthase, alpha subunit id=4261356 bin=GWF2_Lentisphaerae_52_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
riboflavin synthase subunit alpha
Tax=GWF2_Lentisphaerae_52_8_curated
BSR_Ace_LFCR_na_p_83477_12
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(10649..11680)
DNA (1032bp) protein (344aa)
riboflavin biosynthesis protein RibD (EC:3.5.4.26 1.1.1.193)
Riboflavin biosynthesis protein RibD id=4301627 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_44_16_curated
BSR_Ace_LFCR_na_p_83477_13
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(11721..12647)
DNA (927bp) protein (309aa)
Signal recognition particle receptor FtsY id=3876326 bin=GWF2_Lentisphaerae_52_8 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
ftsY; signal recognition particle-docking protein ftsy
Tax=GWF2_Lentisphaerae_44_16_curated
BSR_Ace_LFCR_na_p_83477_14
GWF2_Lentisphaerae_44_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(12644..13156)
DNA (513bp) protein (171aa)
N utilization substance protein B homolog id=3790119 bin=GWF2_Lentisphaerae_49_21 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
NusB antitermination factor
Tax=GWF2_Lentisphaerae_44_16_curated
BSR_Ace_LFCR_na_p_83477_15
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

comp(13153..13629)
DNA (477bp) protein (159aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase id=3876322 bin=GWF2_Lentisphaerae_52_8 species=Mitsuokella multacida genus=Mitsuokella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=GWF2_Lentisphaerae_45_14_curated
BSR_Ace_LFCR_na_p_83477_16
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13640..13786)
DNA (147bp) protein (49aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R4Z7_9CLOT
GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
Displaying 16 items

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