ggKbase home page

BSR_Ace_UAPBR_inlet_at_71222

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_inlet_at_71222_1
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..225
DNA (225bp) protein (75aa)
oxidoreductase n=1 Tax=Desulfovibrio longus RepID=UPI0003B30143
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:EGB14330.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
BSR_Ace_UAPBR_inlet_at_71222_2
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

228..638
DNA (411bp) protein (137aa)
putative Holliday junction resolvase (EC:3.1.-.-)
Holliday junction resolvase n=1 Tax=Desulfovibrio longus RepID=UPI0003B64DA1
Tax=GWA2_Desulfovibrionales_65_9_curated
BSR_Ace_UAPBR_inlet_at_71222_3
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

617..1696
DNA (1080bp) protein (360aa)
Aminodeoxychorismate lyase n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VUD9_DESAO
aminodeoxychorismate lyase
Aminodeoxychorismate lyase {ECO:0000313|EMBL:ACS79187.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
BSR_Ace_UAPBR_inlet_at_71222_4
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1737..2471)
DNA (735bp) protein (245aa)
ABC-type amino acid transport/signal transduction systems, periplasmic component/domain id=3130847 bin=GWB1_CP_36_13 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
family 3 extracellular solute-binding protein
Tax=GWA2_Desulfovibrionales_65_9_curated
BSR_Ace_UAPBR_inlet_at_71222_5
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2559..3218)
DNA (660bp) protein (220aa)
Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) RepID=B7G2R6_PHATC
Uncharacterized protein {ECO:0000313|EMBL:KJS35647.1}; TaxID=1629718 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
conserved protein of unknown function
BSR_Ace_UAPBR_inlet_at_71222_6
unknown

Not on your lists

3508..3612
DNA (105bp) protein (35aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_at_71222_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3600..4460
DNA (861bp) protein (287aa)
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:KCZ71475.1}; EC=1.6.99.3 {ECO:0000313|EMBL:KCZ71475.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00037C648B
epimerase
BSR_Ace_UAPBR_inlet_at_71222_8
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4489..5508)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00037CE763
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:EGB14339.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
BSR_Ace_UAPBR_inlet_at_71222_9
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5510..6421)
DNA (912bp) protein (304aa)
CTU1/ATPBD3 family protein MJ1478 n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00035C833B
PP-loop domain-containing protein
Tax=GWA2_Desulfovibrionales_65_9_curated
BSR_Ace_UAPBR_inlet_at_71222_10
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6441..6638)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RB20_9DELT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO23968.1}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio hydrothermalis AM13 = DSM 14728.;"
BSR_Ace_UAPBR_inlet_at_71222_11
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6807..7178
DNA (372bp) protein (124aa)
Response regulator receiver protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JBU9_DESDE
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:EGB14342.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
BSR_Ace_UAPBR_inlet_at_71222_12
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7259..7930
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00037FE151
peptidase M50
Tax=GWA2_Desulfovibrionales_65_9_curated
BSR_Ace_UAPBR_inlet_at_71222_13
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7943..8944
DNA (1002bp) protein (334aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
tryptophanyl-tRNA synthase n=1 Tax=Desulfovibrio longus RepID=UPI0003B4C2EC
Tax=GWA2_Desulfovibrionales_65_9_curated
BSR_Ace_UAPBR_inlet_at_71222_14
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8970..9398
DNA (429bp) protein (143aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio africanus PCS.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Desulfovibrio africanus PCS RepID=M5PQ60_DESAF
FKBP-type peptidylprolyl isomerase
BSR_Ace_UAPBR_inlet_at_71222_15
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9449..10612
DNA (1164bp) protein (388aa)
Aminotransferase class I and II n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FLE9_DESAA
aspartate aminotransferase
Tax=GWA2_Desulfovibrionales_65_9_curated
BSR_Ace_UAPBR_inlet_at_71222_16
unknown

Not on your lists

10716..11093
DNA (378bp) protein (126aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_at_71222_17
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11090..11554)
DNA (465bp) protein (155aa)
MarR family transcriptional regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZUS1_9BACT
MarR family transcriptional regulator {ECO:0000313|EMBL:EAY25825.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
MarR family transcriptional regulator
BSR_Ace_UAPBR_inlet_at_71222_18
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11700..14798
DNA (3099bp) protein (1033aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
UvrD/REP helicase n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JBW1_DESDE
UvrD/REP helicase
BSR_Ace_UAPBR_inlet_at_71222_19
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14795..14941)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VUY2_DESAO
hypothetical protein
Tax=BJP_IG2102_Desulfovibrionales_64_25
BSR_Ace_UAPBR_inlet_at_71222_20
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14992..15846
DNA (855bp) protein (285aa)
Putative uncharacterized protein n=1 Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VUY3_DESAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU63491.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
BSR_Ace_UAPBR_inlet_at_71222_21
GWA2_Desulfovibrionales_65_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15843..16373
DNA (531bp) protein (177aa)
Cobalbumin biosynthesis protein n=1 Tax=Desulfovibrio desulfuricans ND132 RepID=F0JBW4_DESDE
cobalbumin biosynthesis protein
Tax=GWA2_Desulfovibrionales_65_9_curated
BSR_Ace_UAPBR_inlet_at_71222_22
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16348..17343
DNA (996bp) protein (332aa)
DHH family phosphoesterase n=1 Tax=Desulfovibrio oxyclinae RepID=UPI00036FD60F
phosphoesterase RecJ domain-containing protein
Tax=BJP_IG2102_Desulfovibrionales_64_25
BSR_Ace_UAPBR_inlet_at_71222_23
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17347..19977
DNA (2631bp) protein (877aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2).;"
DNA polymerase I n=1 Tax=Desulfovibrio longus RepID=UPI0003B6C21A
DNA polymerase I
BSR_Ace_UAPBR_inlet_at_71222_24
unknown

Not on your lists

20266..20451
DNA (186bp) protein (62aa)

This feature has no annotations

BSR_Ace_UAPBR_inlet_at_71222_25
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20522..22159
DNA (1638bp) protein (546aa)
Ferredoxin-dependent glutamate synthase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQH2_DESBD
ferredoxin-dependent glutamate synthase
Tax=BJP_08E140C01_Desulfomicrobium_58_14
BSR_Ace_UAPBR_inlet_at_71222_26
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22295..23455
DNA (1161bp) protein (387aa)
Histidine kinase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQH3_DESBD
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACU90375.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
BSR_Ace_UAPBR_inlet_at_71222_27
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23424..24101
DNA (678bp) protein (226aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LQH4_DESBD
LuxR family transcriptional regulator
Tax=BJP_08E140C01_Desulfomicrobium_58_14
BSR_Ace_UAPBR_inlet_at_71222_28
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24200..24415
DNA (216bp) protein (72aa)
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:KJR97168.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
Displaying 28 items

View Taxonomy