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BSR_Ace_UAPBR_effluent_p_54070

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
BSR_Ace_UAPBR_effluent_p_54070_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(211..720)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RSH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL71568.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
metal dependent phophohydrolase
BSR_Ace_UAPBR_effluent_p_54070_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(911..1741)
DNA (831bp) protein (277aa)
glycosyltransferase family 8 n=1 Tax=Desulfitobacterium sp. PCE1 RepID=UPI00036A1107
Glycosyl transferase 8 family protein {ECO:0000313|EMBL:KIE46449.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
LPS:glycosyltransferase
BSR_Ace_UAPBR_effluent_p_54070_3
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2239..4899
DNA (2661bp) protein (887aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY4_9FIRM
BSR_Ace_UAPBR_effluent_p_54070_4
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4959..5300
DNA (342bp) protein (114aa)
Histidine triad domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PKP4_9FIRM
Histidine triad domain protein {ECO:0000313|EMBL:EFB76552.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
BSR_Ace_UAPBR_effluent_p_54070_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5389..5931
DNA (543bp) protein (181aa)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65191.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
BSR_Ace_UAPBR_effluent_p_54070_6
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6224..6766
DNA (543bp) protein (181aa)
Adenine phosphoribosyltransferase {ECO:0000313|EMBL:KJF41274.1}; EC=2.4.2.7 {ECO:0000313|EMBL:KJF41274.1};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY6_9FIRM
BSR_Ace_UAPBR_effluent_p_54070_7
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6767..8842
DNA (2076bp) protein (692aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF41275.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
ComEC/Rec2-related protein
BSR_Ace_UAPBR_effluent_p_54070_8
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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8843..9916
DNA (1074bp) protein (358aa)
DNA polymerase III, delta subunit n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY8_9FIRM
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EHL65193.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
DNA polymerase III, delta subunit
BSR_Ace_UAPBR_effluent_p_54070_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9903..11183
DNA (1281bp) protein (427aa)
Small primase-like proteins (Toprim domain) (EC:3.1.26.8)
Ribonuclease M5 n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXY9_9FIRM
Ribonuclease M5 {ECO:0000313|EMBL:EHL65194.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
BSR_Ace_UAPBR_effluent_p_54070_10
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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11180..12001
DNA (822bp) protein (274aa)
rrmA; ribosomal RNA large subunit methyltransferase A (EC:2.1.1.51)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y1H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27670.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
BSR_Ace_UAPBR_effluent_p_54070_11
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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12138..12614
DNA (477bp) protein (159aa)
Uncharacterized protein family UPF0066 n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DRV4_DESRL
hypothetical protein
Uncharacterized protein family UPF0066 {ECO:0000313|EMBL:AEG60978.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
BSR_Ace_UAPBR_effluent_p_54070_12
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12893..13582
DNA (690bp) protein (230aa)
Putative transcriptional regulatory protein WalR n=2 Tax=Oscillibacter RepID=U2Q967_9FIRM
Putative transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERK65572.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
transcriptional regulator
BSR_Ace_UAPBR_effluent_p_54070_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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13593..14696
DNA (1104bp) protein (368aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Oscillibacter RepID=U2QSZ5_9FIRM
hypothetical protein
BSR_Ace_UAPBR_effluent_p_54070_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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14832..15881
DNA (1050bp) protein (350aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D510_9FIRM
BSR_Ace_UAPBR_effluent_p_54070_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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15878..16624
DNA (747bp) protein (249aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D D-dipeptidase/D D-carboxypeptidase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D8X1_9FIRM
D D-dipeptidase/D D-carboxypeptidase {ECO:0000313|EMBL:CCX75274.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
BSR_Ace_UAPBR_effluent_p_54070_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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16621..18699
DNA (2079bp) protein (693aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
vanT; serine-type alanine/serine racemase (EC:5.1.1.1)
Alanine racemase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4V5_9FIRM
BSR_Ace_UAPBR_effluent_p_54070_17
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

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18706..19119
DNA (414bp) protein (138aa)
Two component transcriptional regulator n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQM1_9BACT
Two component transcriptional regulator {ECO:0000313|EMBL:BAL58783.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
sensory transduction protein YcbL
BSR_Ace_UAPBR_effluent_p_54070_18
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(19204..20325)
DNA (1122bp) protein (374aa)
UPI0002EA8804 related cluster n=1 Tax=unknown RepID=UPI0002EA8804
Uncharacterized protein {ECO:0000313|EMBL:EHF02329.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
aspartate/tyrosine/aromatic aminotransferase
BSR_Ace_UAPBR_effluent_p_54070_19
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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20635..21042
DNA (408bp) protein (136aa)
Dinitrogenase iron-molybdenum cofactor n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LB92_9FIRM
Dinitrogenase iron-molybdenum cofactor {ECO:0000313|EMBL:EFY05893.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
Predicted DNA-binding proteins
BSR_Ace_UAPBR_effluent_p_54070_20
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21172..22065
DNA (894bp) protein (298aa)
AraC family transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035C6CA3
DNA-binding domain-containing protein
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AET67905.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
BSR_Ace_UAPBR_effluent_p_54070_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22028..22453
DNA (426bp) protein (142aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=D5Q5U1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCK93449.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T20.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_54070_22
Clostridium sp. SY8519, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22813..23931)
DNA (1119bp) protein (373aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1042156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain SY8519).;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Clostridium sp. (strain SY8519) RepID=F7V425_CLOSS
hypothetical protein
BSR_Ace_UAPBR_effluent_p_54070_23
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23928..25100)
DNA (1173bp) protein (391aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KNY3_9FIRM
Cysteine desulfurase NifS {ECO:0000313|EMBL:ERJ93780.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
BSR_Ace_UAPBR_effluent_p_54070_24
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25237..25458)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R196_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK64087.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_54070_25
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25464..26087)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002D5F529
ABC-2 membrane transporter-like protein
ABC-2 membrane transporter-like protein {ECO:0000313|EMBL:AGY75661.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
BSR_Ace_UAPBR_effluent_p_54070_26
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26084..26950)
DNA (867bp) protein (289aa)
ABC transporter n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GLJ6_EUBLK
ABC transporter
ABC transporter {ECO:0000313|EMBL:ADO36569.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
BSR_Ace_UAPBR_effluent_p_54070_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26955..27329)
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family n=3 Tax=Clostridiales RepID=G9YPN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54984.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
BSR_Ace_UAPBR_effluent_p_54070_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27535..28182)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98665.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
Displaying 28 items

View Taxonomy